|
|
|
Publications
Return to Publication Home
Publications by Mark A. Musen, M.D., Ph.D
There are 266 publications that list Mark A. Musen as an author.
- BMIR-2008-1319
- Network Analysis of Intrinsic Functional Brain Connectivity in Alzheimer's Disease
- K. S. Supekar, V. Menon, D. L. Rubin, M. A. Musen, M. Greicius
- Public Library of Science-Computational Biology., PLoS Computational Biology, June 2008. Published in 2008
- BMIR-2008-1317
- Help will be provided for this task: Ontology-Based Annotator Web Service
- C. Jonquet, M. A. Musen, N. H. Shah
- . Published in 2008
- BMIR-2008-1311
- A Generic Ontology For Collaborative Ontology-Development Workflows
- A. Sebastian, N. F. Noy, T. Tudorache, M. A. Musen
- . Published in 2008
- BMIR-2008-1310
- Collecting Community-Based Mappings in an Ontology Repository
- N. F. Noy, N. B. Griffith, M. A. Musen
- . Published in 2008
- BMIR-2008-1309
- Developing Biomedical Ontologies Collaboratively
- N. F. Noy, T. Tudorache, S. de Coronado, M. A. Musen
- . Published in 2008
- BMIR-2008-1308
- Representing the NCI Thesaurus in OWL DL: Modeling tools help modeling languages
- N. F. Noy, S. de Coronado, H. Solbrig, G. Fragoso, F. W. Hartel, M. A. Musen
- Applied Ontology Journal, to appear. Published in 2008
- BMIR-2008-1307
- A System for Ontology-Based Annotation of Biomedical Data
- C. Jonquet, M. A. Musen, N. H. Shah
- International Workshop on Data Integration in The Life Sciences 2008, DILS'08, Evry, France, Springer-Verlag, 5109, Lecture Notes in BioInformatics, 144-152. Published in 2008
- BMIR-2008-1306
- Ontology-driven Indexing of Public Datasets for Translational Bioinformatics
- N. H. Shah, A. P. Chiang, A. J. Butte, R. Chen, M. A. Musen
- American Medical Informatics Association Symposium on Translational Bioinformatics, San Francisco, CA, March 10-12, 2008. Published in 2008
- BMIR-2008-1298
- BioPortal: A Web Portal to Biomedical Ontologies
- D. L. Rubin, D. de Abreu Moreira, P. P. Kanjamala, M. A. Musen
- AAAI Spring Symposium Series, Symbiotic Relationships between Semantic Web and Knowledge Engineering, Stanford University, (in press). Published in 2008
- BMIR-2007-1314
- Knowledge Zone: a public repository of peer-reviewed biomedical ontologies.
- K. S. Supekar, D. L. Rubin, N. F. Noy, M. A. Musen
- MEDINFO, Brisbane, Australia, 812-6. Published in 2007
- BMIR-2007-1294
- Interpretation Errors Related to the GO Annotation File Format
- D. de Abreu Moreira, N. H. Shah, M. A. Musen
- AMIA Annual Symposium Proceedings, Chicago, IL, 759-764. Published in 2007
 - BMIR-2007-1291
- A prototype symbolic model of canonical functional neuroamatomy of the motor system
- I. Talos, D. L. Rubin, M. A. Musen, M. Halle, R. Kikinis
- Journal of Biomedical Informatics, doi:10.1016/j.jbi.2007.11.003, (in press). Published in 2007
- BMIR-2007-1284
- Searching Ontologies Based on Content: Experiments in the Biomedical Domain
- H. Alani, N. F. Noy, N. H. Shah, M. A. Musen
- The Fourth International Conference on Knowledge Capture (K-CAP 2007), Whistler, BC, Canada, ACM, 55-62. Published in 2007
- BMIR-2007-1261
- Protege: A Tool for Managing and Using Terminology in Radiology Applications
- D. L. Rubin, N. F. Noy, M. A. Musen
- Journal of Digital Imaging, J Digit Imaging. Published in 2007
- BMIR-2007-1257
- The SAGE Guideline Model: Achievements and Overview
- S. W. Tu, M. A. Musen, J. G. Mansfield, T. Weida, D. Berg, K. M. Hrabak, C. Parker, J. McClay, R. McClure, M. A. Nyman, J. Glasgow, J. R. Campbell, R. Abarbanel
- Journal of American Medical Informatics Association, JAMIA, 14, 5, 589-598. Published in 2007
 - BMIR-2007-1251
- Querying the Semantic Web with SWRL
- M. J. O'Connor, S. W. Tu, C. I. Nyulas, A. K. Das, M. A. Musen
- The International RuleML Symposium on Rule Interchange and Applications (RuleML2007), Orlando, FL, Springer Verlag. Published in 2007
 - BMIR-2007-1249
- Annotation and query of tissue microarray data using the NCI Thesaurus
- N. H. Shah, D. L. Rubin, I. Espinosa, K. Montgomery, M. A. Musen
- BMC Bioinformatics, 8, 296. Published in 2007
- BMIR-2007-1247
- Which Annotation did you mean?
- N. H. Shah, M. A. Musen
- . Published in 2007
 - BMIR-2007-1245
- Using Semantic Web Technologies for Knowledge-Driven Querying of Biomedical Data
- M. J. O'Connor, R. D. Shankar, S. W. Tu, C. I. Nyulas, D. B. Parrish, A. K. Das, M. A. Musen
- 11th Conference on Artificial Intelligence in Medicine (AIME2007), Amsterdam, Netherlands, Springer, LNAI 4594, 267-276. Published in 2007
 - BMIR-2007-1244
- Efficiently Querying Relational Databases using OWL and SWRL
- M. J. O'Connor, R. D. Shankar, S. W. Tu, C. I. Nyulas, A. K. Das, M. A. Musen
- The First International Conference on Web Reasoning and Rule Systems, Innsbruck, Austria, Springer, LNCS 4524, 361-363. Published in 2007
- BMIR-2007-1242
- UMLS-Query: A Perl Module for Querying the UMLS
- N. H. Shah, M. A. Musen
- . Published in 2007
- BMIR-2006-1264
- Ontology-Based Representation of Simulation Models of Physiology
- D. L. Rubin, D. Grossman, M. Neal, D. L. Cook, J. B. Bassingthwaighte, M. A. Musen
- AMIA Annual Symposium, Proc AMIA Symp, 664-668. Published in 2006
- BMIR-2006-1248
- Clench2.0: Cluster enrichment analysis and visualization of expression, annotation and transcription factor binding site data
- N. H. Shah, N. V. Fedoroff, M. A. Musen
- . Published in 2006
- BMIR-2006-1233
- Ontology-based Annotation and Query of Tissue Microarray Data
- N. H. Shah, D. L. Rubin, K. S. Supekar, M. A. Musen
- AMIA Annual Symposium, Washington DC, AMIA, 709-713. Published in 2006
- BMIR-2006-1231
- Using Semantic Dependencies for Consistency Management of an Ontology of Brain-Cortex Anatomy
- O. Dameron, B. Gibaud, M. A. Musen
- . Published in 2006
- BMIR-2006-1224
- A Framework for Ontology Evolution in Collaborative Environments
- N. F. Noy, A. Chugh, W. Liu, M. A. Musen
- 5th International Semantic Web Conference, Athens, GA. Published in 2006
- BMIR-2006-1142
- Topic-Specific Trust and Open Rating Systems: An Approach for Ontology Evaluation
- H. Lewen, K. S. Supekar, N. F. Noy, M. A. Musen
- Workshop on Evaluation of Ontologies for the Web (EON2006) at the 15th International World Wide Web Conference (WWW 2006), Edinburgh, UK. Published in 2006
- BMIR-2006-1119
- Using ontologies linked with geometric models to reason about penetrating injuries.
- D. L. Rubin, O. Dameron, Y. Bashir, D. Grossman, M. A. Musen
- Artificial Intelligence in Medicine, AIIM, 37, 3, 167 - 176. Published in 2006
- BMIR-2006-1118
- The National Center for Biomedical Ontology: Advancing Biomedicine through Structured Organization of Scientific Knowledge.
- D. L. Rubin, N. F. Noy, J. D. Richter, B. Smith, M. A. Storey, H. Solbrig, C. G. Chute, I. Sim, M. Ashburner, M. Westerfield, S. Misra, C. J. Mungall, S. E. Lewis, M. A. Musen
- OMICS: A Journal of Integrative Biology, 10, 2, 185-198. Published in 2006
- BMIR-2006-1099
- Use of Declarative Statements in Creating and Maintaining Computer-Interpretable Knowledge Bases for Guideline-Based Care
- S. W. Tu, K. M. Hrabak, J. R. Campbell, J. Glasgow, M. A. Nyman, R. McClure, M. James, R. Abarbanel, J. G. Mansfield, S. B. Martins, M. K. Goldstein, M. A. Musen
- AMIA 2006 Annual Symposium, Washington DC, accepted. Published in 2006
- BMIR-2005-1143
- Semantic Clinical Guideline Documents
- H. Eriksson, S. W. Tu, M. A. Musen
- AMIA Symposium, Washington, D.C., 236-240. Published in 2005
- BMIR-2005-1115
- Using OWL and Description Logics based classification for reasoning in biomedical applications.
- D. L. Rubin, O. Dameron, M. A. Musen
- 8th International Protégé Conference, Madrid, Spain. Published in 2005
 - BMIR-2005-1114
- Knowledge-Based Syndromic Surveillance for Bioterrorism
- M. Crubezy, M. J. O'Connor, D. Buckeridge, M. A. Musen
- 2005 AAAI Spring Symposium on AI Technologies for Homeland Security, Stanford, CA. Published in 2005
- BMIR-2005-1112
- User ratings of ontologies: Who will rate the raters?
- N. F. Noy, R. V. Guha, M. A. Musen
- Proceedings of the AAAI 2005 Spring Symposium on Knowledge Collection from Volunteer Contributors, Stanford, CA, American Association for Artificial Intelligence (www.aaai.org). Published in 2005
- BMIR-2005-1110
- The Protege OWL Experience: workshop on OWL: Experiences and Directions
- H. Knublauch, M. Horridge, A. L. Rector, R. Stevens, N. Drummond, P. Lord, N. F. Noy, J. Seidenberg, H. Wang, M. A. Musen
- Fourth International Semantic Web Conference (ISWC2005), Galway, Ireland. Published in 2005
- BMIR-2005-1100
- Use of Description Logic Classification to Reason about Consequences of Penetrating Injuries
- D. L. Rubin, O. Dameron, M. A. Musen
- AMIA 2005 Symposium Proceedings, 649-653. Published in 2005
- BMIR-2005-1084
- Using an ontology of human anatomy to inform reasoning with geometric models
- D. L. Rubin, O. Dameron, Y. Bashir, D. Grossman, M. A. Musen
- Stud Health Technol Inform, 111, 429-35. Published in 2005
 - BMIR-2005-1080
- Supporting Rule System Interoperability on the Semantic Web with SWRL
- M. J. O'Connor, H. Knublauch, S. W. Tu, B. Grossof, M. Dean, W. E. Grosso, M. A. Musen
- Fourth International Semantic Web Conference (ISWC2005), Galway, Ireland. Published in 2005
- BMIR-2005-1073
- Document-Oriented Views of Guideline Knowledge Bases
- S. W. Tu, S. Condamoor, T. Mather, R. Hall, N. Jones, M. A. Musen
- . Published in 2005
 - BMIR-2005-1072
- Ontology-Centered Syndromic Surveillance for Bioterrorism
- M. Crubezy, M. J. O'Connor, D. Buckeridge, Z. Pincus, M. A. Musen
- IEEE Intelligent Systems, 20, 5, 26-35. Published in 2005
- BMIR-2005-1067
- Challenges in converting frame-based ontology into OWL: the Foundational Model of Anatomy case-study
- O. Dameron, D. L. Rubin, M. A. Musen
- AMIA Annual Symposium, Washington DC, 181-185. Published in 2005
 - BMIR-2004-1300
- A knowledge-based framework for deploying surveillance problem solvers
- D. Buckeridge, M. J. O'Connor, H. Xu, M. A. Musen
- International Conference on Information and Knowledge Engineering (IKE'04), Las Vegas, NV. Published in 2004
- BMIR-2004-1268
- Linking ontologies with three-dimensional models of anatomy to predict the effects of penetrating injuries
- D. L. Rubin, Y. Bashir, D. Grossman, M. A. Musen
- IEEE EMBS, San Francisco. Published in 2004
- BMIR-2004-1131
- Making Biomedical Ontologies and Ontology Repositories Work
- N. F. Noy, D. L. Rubin, M. A. Musen
- IEEE Intelligent Systems, 19, 6, 78-81. Published in 2004
- BMIR-2004-1128
- Specifying Ontology Views by Traversal
- N. F. Noy, M. A. Musen
- Third International Conference on the Semantic Web (ISWC-2004), Hisroshima, Japan, Springer Berlin / Heidelberg, 713. Published in 2004
- BMIR-2004-1127
- Tracking Changes During Ontology Evolution
- N. F. Noy, S. Kunnatur, M. Klein, M. A. Musen
- Third International Conference on the Semantic Web, Hiroshima, Japan, Springer-Verlag Berlin Heidelberg, 259–273. Published in 2004
- BMIR-2004-1125
- Using PROMPT Ontology-Comparison Tools in the EON Ontology Alignment Contest
- N. F. Noy, M. A. Musen
- Workshop on Evaluation of Ontology-based Tools (EON2004) at the Third International Conference on the Semantic Web (ISWC-2004), Hisroshima, Japan. Published in 2004
- BMIR-2004-1123
- Environment for Composing Constraint Axioms by Instantiating Templates
- C. J. Hou, N. F. Noy, M. A. Musen
- International Journal of Human-Computer Studies. Published in 2004
- BMIR-2004-1098
- Kwiz, a Knowledge-Acquisition Framework to Encode Guidelines
- R. D. Shankar, S. W. Tu, M. A. Musen
- . Published in 2004
- BMIR-2004-1070
- Accessing and manipulating ontologies using web services.
- O. Dameron, N. F. Noy, H. Knublauch, M. A. Musen
- Third International Semantic Web Conference (ISWC2004), Hiroshima, Japan. Published in 2004
- BMIR-2004-1069
- Using semantic dependencies for consistency management of an ontology of brain-cortex anatomy
- O. Dameron, B. Gibaud, M. A. Musen
- First International Workshop on Formal Biomedical Knowledge Representation KRMED04, Whistler, Canada, 30-38. Published in 2004
 - BMIR-2004-1031
- Translating research into practice: organizational issues in implementing automated decision support for hypertension in three medical centers
- M. K. Goldstein, R. W. Coleman, S. W. Tu, M. J. O'Connor, S. B. Martins, P. W. Lavori, M. G. Shilpak, E. Z. Oddone, A. Advani, P. Gholami, B. B. Hoffman, R. D. Shankar, M. A. Musen
- Journal of the American Medical Informatics Association, JAMIA, 11, 5, 368-376. Published in 2004
- BMIR-2004-1015
- SAGE Guideline Modeling: Motivations and Methodology
- S. W. Tu, J. R. Campbell, M. A. Musen
- Computer-Based Support for Clinical Guidelines and Protocols: Proceedings of the Symposium on Computerized Guidelines and Protocols (CGP-2004), K. Kaiser, S. Miksch and S. W. Tu, IOS Press, Amsterdam, 167-171. Published in 2004
- BMIR-2004-1011
- The Protégé OWL Plugin: An Open Development Environment for Semantic Web Applications
- H. Knublauch, R. Fergerson, N. F. Noy, M. A. Musen
- Third International Semantic Web Conference, Hiroshima, Japan. Published in 2004
- BMIR-2004-1007
- Editing Description Logic Ontologies with the Protégé OWL Plugin
- H. Knublauch, A. L. Rector, M. A. Musen
- International Workshop on Description Logics (DL2004), Whistler, Canada. Published in 2004
- BMIR-2004-1006
- Weaving the Biomedical Semantic Web with the Protégé OWL Plugin
- H. Knublauch, O. Dameron, M. A. Musen
- First International Workshop on Formal Biomedical Knowledge Representation, Whistler, Canada. Published in 2004
- BMIR-2004-0979
- Evaluating Provider Adherence in a Trial of a Guideline-Based Decision Support System for Hypertension
- A. Chan, R. W. Coleman, S. B. Martins, A. Advani, H. B. Bosworth, E. Z. Oddone, M. G. Shlipak, M. A. Musen
- MedInfo 2004, San Francisco, California, Sept 7 - 11. Published in 2004
 - BMIR-2003-1194
- BioSTORM: A System for Automated Surveillance of Diverse Data Sources
- M. J. O'Connor, D. Buckeridge, M. K. Choy, M. Crubezy, Z. Pincus, M. A. Musen
- AMIA Annu Symp Proc. Published in 2003
- BMIR-2003-0978
- Mediating Knowledge between Application Components
- M. Crubezy, Z. Pincus, M. A. Musen
- . Published in 2003
- BMIR-2003-0973
- The PROMPT Suite: Interactive Tools For Ontology Merging And Mapping
- N. F. Noy, M. A. Musen
- International Journal of Human-Computer Studies. Published in 2003
- BMIR-2003-0970
- Modeling Guidelines for Integration into Clinical
Workflow
- S. W. Tu, J. R. Campbell, K. M. Hrabak, J. McClay, S. M. Huff, R. McClure, C. Parker, R. Rocha, R. Abarbanel, N. Beard, J. Glasgow, J. G. Mansfield, P. Ram, Q. Ye, E. Mays, T. Weida, C. G. Chute, K. McDonald, D. Mohr, M. A. Nyman, S. M. Scheitel, H. Solbrig, D. Zill, M. K. Goldstein, R. D. Shankar, M. A. Musen
- . Published in 2003
- BMIR-2003-0966
- The Structure of Guideline Recommendations: A
Synthesis
- S. W. Tu, J. R. Campbell, M. A. Musen
- . Published in 2003
- BMIR-2003-0964
- An Analytic Framework for SpaceTime Aberrancy
Detection in Public Health Surveillance Data
- D. Buckeridge, P. Switzer, M. Crubezy, M. A. Musen
- . Published in 2003
- BMIR-2003-0961
- Ontology Versioning as an Element of an Ontology-Evolution Framework
- N. F. Noy, M. A. Musen
- IEEE Intelligent Systems. Published in 2003
- BMIR-2003-0958
- Configuring Online Problem-Solving Resources with the Internet
Reasoning Service
- M. Crubezy, E. Motta, W. Lu, M. A. Musen
- IEEE Intelligent Systems, 2, March-April, 34-42. Published in 2003
- BMIR-2003-0957
- Ontologies in Support of Problem Solving
- M. Crubezy, M. A. Musen
- . Published in 2003
- BMIR-2003-0956
- Contextualizing Heterogeneous Data for Integration
- Z. Pincus, M. A. Musen
- . Published in 2003
- BMIR-2003-0954
- Developing Quality Indicators and Auditing Protocols
from Formal Guideline Models: Knowledge Representation and Transformations
- A. Advani, Y. Shahar, M. K. Goldstein, M. A. Musen
- . Published in 2003
- BMIR-2003-0952
- A Modular Framework for Automated Space-Time
Surveillance Analysis of Public Health Data
- D. Buckeridge, P. Switzer, M. Crubezy, M. A. Musen
- . Published in 2003
- BMIR-2002-0953
- A Framework For Evidence-Adaptive Quality Assessment
That Unifies Guideline-Based And Performance-Indicator Approaches
- A. Advani, M. K. Goldstein, M. A. Musen
- . Published in 2002
 - BMIR-2002-0946
- Knowledge-Based Bioterrorism Surveillance
- D. Buckeridge, J. Graham, M. J. O'Connor, M. K. Choy, S. W. Tu, M. A. Musen
- AMIA Annual Symposium, San Antonio, TX. Published in 2002
- BMIR-2002-0945
- Bioterrorism Preparedness and Response: Use of
Information Technologies and Decision Support Systems
- D. M. Bravata, D. K. Owens, D. Buckeridge, C. Haberland, C. Rydzak, M. Schleinitz, W. M. Smith, H. Szeto, M. A. Musen
- . Published in 2002
- BMIR-2002-0944
- Use of Protégé-2000 to Encode Clinical Guidelines
- R. D. Shankar, S. W. Tu, M. A. Musen
- . Published in 2002
- BMIR-2002-0943
- The Evolution of Protégé: An Environment for Knowledge-Based Systems Development
- J. Gennari, R. Fergerson, W. E. Grosso, M. Crubezy, H. Eriksson, N. F. Noy, S. W. Tu, M. A. Musen
- . Published in 2002
 - BMIR-2002-0941
- The Chronus II Temporal Database Mediator
- M. J. O'Connor, S. W. Tu, M. A. Musen
- AMIA Annual Symposium, San Antonio, TX. Published in 2002
- BMIR-2002-0940
- Protocol Design Patterns: Domain-Oriented Abstractions
to Support the Authoring Of Computer-Executable Clinical Trials
- J. H. Nguyen, M. G. Kahn, C. A. Broverman, M. A. Musen
- . Published in 2002
- BMIR-2002-0936
- Evaluating Ontology-Mapping Tools: Requirements and Experience
- N. F. Noy, M. A. Musen
- . Published in 2002
- BMIR-2002-0933
- A Template-Based Approach Toward Acquisition of Logical
Sentences. Intelligent Information Processing 2002, World Computer Congress, Montreal, Canada
- C. I. Hou, N. F. Noy, M. A. Musen
- . Published in 2002
- BMIR-2002-0931
- Configuring Online Problem-Solving Resources with the
Internet Reasoning Service
- M. Crubezy, W. Lu, E. Motta, M. A. Musen
- . Published in 2002
- BMIR-2002-0927
- PromptDiff: A Fixed-Point Algorithm for Comparing
Ontology Versions
- N. F. Noy, M. A. Musen
- . Published in 2002
- BMIR-2002-0925
- Pushing the Envelope: Challenges in a Frame-Based Representation of Human Anatomy
- N. F. Noy, J. L. Mejino, C. Rosse, M. A. Musen
- . Published in 2002
- BMIR-2002-0916
- Medical Informatics: Searching For Underlying Components
- M. A. Musen
- Methods of Information in Medicine, Stanford University, Schattauer GmbH, 41, 12-19. Published in 2002
- BMIR-2002-0912
- Medical Quality Assessment by Scoring Adherence to
Guideline Intentions
- A. Advani, Y. Shahar, M. A. Musen
- . Published in 2002
- BMIR-2002-0911
- A Typology for Modeling Processes in Clinical
Guidelines and Protocols
- S. W. Tu, P. D. Johnson, M. A. Musen
- . Published in 2002
 - BMIR-2001-1299
- A Knowledge-Based Approach To Temporal Abstraction Of Clinical Data For Disease Surveillance
- M. A. Musen, M. J. O'Connor, D. Buckeridge, J. Graham, N. F. Noy, Y. Shahar, K. A. Henry
- NATO Human Factors in Medicine Symposium on Operational Issues in Chemical and Biological Defense, Estoril, Portugal. Published in 2001
- BMIR-2001-0900
- A Formal Method to Resolve Temporal Mismatches in Clinical Databases
- A. K. Das, M. A. Musen
- AMIA Annual Symposium. Published in 2001
- BMIR-2001-0895
- The Internet Reasoning Service: Delivering Configurable
Problem-Solving Components to Web Users
- M. Crubezy, W. Lu, E. Motta, M. A. Musen
- Submitted to the First International Conference on
Knowledge Capture (K-CAP 2001),. Published in 2001
- BMIR-2001-0894
- A Case Study in Using Protege-2000 as a Tool for CommonKADS
- A. T. Schreiber, M. Crubezy, M. A. Musen
- 12th International Conference on Knowledge Engineering and Knowledge Management (EKAW'2000), Juan-les-Pins, France. Published in 2001
- BMIR-2001-0890
- Integration of Textual Guideline Documents with Formal
Guideline Knowledge Bases
- R. D. Shankar, S. W. Tu, S. B. Martins, L. M. Fagan, M. K. Goldstein, M. A. Musen
- AMIA 2001. Published in 2001
- BMIR-2001-0889
- Anchor-PROMPT: Using Non-Local Context for Semantic Matching
- N. F. Noy, M. A. Musen
- Workshop on Ontologies and Information Sharing at the Seventeenth International Joint Conference on Artificial Intelligence (IJCAI-2001), Seattle, WA. Published in 2001
- BMIR-2001-0877
- A Client-Server Framework for Deploying a Decision-Support System in a Resource-Constrained Environment
- M. J. O'Connor, S. W. Tu, A. Advani, R. W. Coleman, M. K. Goldstein, R. D. Shankar, M. A. Musen
- . Published in 2001
- BMIR-2001-0876
- A Virtual Medical Record for Guideline-Based Decision
Support
- P. D. Johnson, S. W. Tu, I. Purves, M. A. Musen
- AMIA Annual Symposium, Washington, DC. Published in 2001
 - BMIR-2001-0875
- Patient Safety in Guideline-Based Decision Support for Hypertension Management: ATHENA DSS
- M. K. Goldstein, B. B. Hoffman, R. W. Coleman, S. W. Tu, M. J. O'Connor, S. B. Martins, A. Advani, R. D. Shankar, M. A. Musen
- AMIA Annual Symposium, Washington, DC. Published in 2001
- BMIR-2001-0872
- Creating Semantic Web Contents with Protege-2000
- N. F. Noy, M. Sintek, S. Decker, M. Crubezy, R. Fergerson, M. A. Musen
- IEEE Intelligent Systems, 16, 2, 60-71. Published in 2001
- BMIR-2001-0869
- Representation Formalisms and Computational Methods for
Modeling Guideline-Based Patient Care
- S. W. Tu, M. A. Musen
- First European Workshop on Computer-based Support for Clinical Guidelines and Protocols, Leipzig, Germany. Published in 2001
- BMIR-2001-0868
- Modeling Data and Knowledge in the EON Guideline
Architecture
- S. W. Tu, M. A. Musen
- MedInfo 2001, London, UK. Published in 2001
- BMIR-2001-0866
- Building an Explanation Function for a Hypertension
Decision-Support System
- R. D. Shankar, S. B. Martins, S. W. Tu, M. K. Goldstein, M. A. Musen
- MedInfo2001, London, UK. Published in 2001
 - BMIR-2001-0858
- RASTA: A Distributed Temporal Abstraction System to facilitate Knowledge-Driven Monitoring of Clinical Databases
- M. J. O'Connor, W. E. Grosso, S. W. Tu, M. A. Musen
- Proceedings of 10th World Congress on Medical Informatics (MedInfo2001), London. Published in 2001
- BMIR-2000-1217
- The Impact of Displayed Awards on the Credibility and Retention of Web Site Information
- J. Shon, J. Marshall, M. A. Musen
- Proc AMIA Symposium. Published in 2000
 - BMIR-2000-0857
- Representation of Temporal Indeterminacy in Clinical Databases
- M. J. O'Connor, S. W. Tu, M. A. Musen
- AMIA Annual Symposium, Los Angeles, CA. Published in 2000
- BMIR-2000-0850
- Ontology Acquisition from On-line Knowledge Sources
- Q. Li, P. Shilane, N. F. Noy, M. A. Musen
- AMIA Annual Symposium, Los Angeles, CA. Published in 2000
- BMIR-2000-0844
- Knowledge Representation and Tool Support for
Critiquing Clinical Trial Protocols
- D. L. Rubin, J. Gennari, M. A. Musen
- AMIA Annual Symposium, Los Angeles, CA. Published in 2000
- BMIR-2000-0843
- Representation of Nursing Guidelines Using the EON
Guideline Model
- Z. Lin, S. W. Tu, M. A. Musen
- . Published in 2000
 - BMIR-2000-0840
- Implementing Clinical Practice Guidelines While Taking Account of Changing Evidence: ATHENA DSS, an Easily Modifiable Decision-Support System for Managing Hypertension in Primary Care
- M. K. Goldstein, B. B. Hoffman, R. W. Coleman, S. W. Tu, A. Advani, M. J. O'Connor, R. D. Shankar, M. A. Musen
- AMIA Annual Symposium, Los Angeles, CA. Published in 2000
- BMIR-2000-0838
- Component-Based Support for Building
- M. A. Musen, R. Fergerson, W. E. Grosso, N. F. Noy, M. Crubezy, J. Gennari
- Conference on Intelligent Information Processing (IIP 2000) of the International Federation for Information Processing World Computer Congress (WCC 20, Beijing. Published in 2000
- BMIR-2000-0835
- How Should We Organize to Do Informatics
- C. P. Friedman, M. E. Frisse, W. V. Slack, W. W. Stead, M. A. Musen
- JAMIA, 5, 3, 293-304. Published in 2000
- BMIR-2000-0834
- Integration and Beyond: Linking Information from Disparate
Sources and into Workflow
- W. W. Stead, R. A. Miller, W. R. Hersh, M. A. Musen
- JAMIA, 7, 2, 135-145. Published in 2000
- BMIR-2000-0833
- Knowledge Engineering and Agent Technology
- M. A. Musen
- . Published in 2000
- BMIR-2000-0831
- PROMPT: Algorithm and Tool for Automated Ontology
Merging and Alignment
- N. F. Noy, M. A. Musen
- Seventeenth National Conference on Artificial Intelligence (AAAI-2000), Austin, TX. Published in 2000
- BMIR-2000-0830
- The knowledge model of Protege-2000: Combining interoperability and flexibility
- N. F. Noy, R. Fergerson, M. A. Musen
- 2th International Conference on Knowledge Engineering and Knowledge Management (EKAW'2000), Juan-les-Pins, France. Published in 2000
- BMIR-2000-0829
- From Guideline Modeling to Guideline Execution:
Defining Guideline-Based Decision-Support Services
- S. W. Tu, M. A. Musen
- AMIA Annual Symposium, Los Angeles, CA. Published in 2000
- BMIR-2000-0826
- The Low Availability of Metadata Elements for
Evaluating the Quality of Medical Information on the World Wide Web
- J. Shon, M. A. Musen
- The AMIA Annual Symposium, Washington, D.C.. Published in 2000
- BMIR-2000-0825
- Knowledge-Acquisition Interfaces for Domain Experts:
An Empirical Evaluation of Protege-2000
- N. F. Noy, W. E. Grosso, M. A. Musen
- Twelfth International Conference on Software Engineering and Knowledge Engineering (SEKE2000), Chicago, IL. Published in 2000
- BMIR-2000-0819
- Scalable Software Architectures for Decision Support
- M. A. Musen
- Methods of Information in Medicine, 38, 229-238. Published in 2000
- BMIR-1999-0816
- A Specification for a Temporal Query System
- M. J. O'Connor, S. W. Tu, M. A. Musen
- . Published in 1999
- BMIR-1999-0813
- SMART: Automated Support for Ontology Merging and
Alignment
- N. F. Noy, M. A. Musen
- Twelfth Banff Workshop on Knowledge Acquisition, Modeling, and Management, Banff, Alberta, Canada. Published in 1999
- BMIR-1999-0809
- Automatic Generation of Ontology Editors
- H. Eriksson, R. Fergerson, Y. Shahar, M. A. Musen
- Twelfth Banff Knowledge Acquisition for Knowledge-based systems Workshop, Banff, Alberta, Canada. Published in 1999
- BMIR-1999-0808
- Evaluation of a Temporal-Abstraction
Knowledge-Acquisition Tool
- Y. Shahar, M. A. Musen
- Twelfth Banff Knowledge Acquisition for Knowledge-Based Systems Workshop, Banff, Alberta, Canada. Published in 1999
- BMIR-1999-0801
- Knowledge Modeling at the Millennium (The Design and
Evolution of Protege-2000)
- W. E. Grosso, H. Eriksson, R. Fergerson, J. Gennari, S. W. Tu, M. A. Musen
- . Published in 1999
- BMIR-1999-0799
- An Algorithm for Merging and Aligning Ontologies:
Automation and Tool Support
- N. F. Noy, M. A. Musen
- Sixteenth National Conference on Artificial Intelligence (AAAI-99), Workshop on Ontology Management, Orlando, FL. Published in 1999
- BMIR-1999-0798
- Stanford Medical Informatics: Uncommon research, common
goals
- M. A. Musen
- MD Computing, 1, 47-50. Published in 1999
 - BMIR-1999-0795
- Integrating a Modern Knowledge-Based System Architecture with a Legacy VA Database: The ATHENA and EON Projects at Stanford
- A. Advani, M. K. Goldstein, R. W. Coleman, M. J. O'Connor, S. W. Tu, M. A. Musen
- AMIA '99, Washington, D.C.. Published in 1999
- BMIR-1999-0794
- Justification of Automated Decision-Making: Medical
Explanation or Medical Argument
- R. D. Shankar, M. A. Musen
- AMIA Fall Symposium, Washington, DC. Published in 1999
 - BMIR-1999-0793
- Applying Temporal Joins to Clinical Databases
- M. J. O'Connor, S. W. Tu, M. A. Musen
- AMIA Annual Symposium, Washington, D.C.. Published in 1999
- BMIR-1999-0789
- A Flexible Approach to Guideline Modeling
- S. W. Tu, M. A. Musen
- AMIA Annual Symposium, Washington, D.C.. Published in 1999
- BMIR-1999-0779
- Tool Support for Authoring Eligibility Criteria for
- D. L. Rubin, J. Gennari, S. Srinivas, A. Yuen, H. Kaizer, J. S. Silva, M. A. Musen
- AMIA Annual Symposium, 369-373. Published in 1999
- BMIR-1999-0767
- Design and Use of Clinical Ontologies Curricular Goals
for the Education of Health-Telematics Professionals
- M. A. Musen
- International Workshop on User Acceptance of Telematics Applications by Healthcare Professionals, Thessaloniki, Greece. Published in 1999
- BMIR-1998-0756
- VM-in-Protege: A Study of Software Reuse
- J. Y. Park, M. A. Musen
- Medinfo '98: Ninth World Congress on Medical Informatics, Seoul, South Korea. Published in 1998
- BMIR-1998-0739
- Handbook of Medical Informatics
- M. A. Musen
- . Published in 1998
- BMIR-1998-0735
- Semi-automated Entry of Clinical Temporal-abstraction
Knowledge
- Y. Shahar, H. Chen, D. P. Stites, L. Basso, H. Kaizer, D. M. Wilson, M. A. Musen
- Journal of the American Medical Informatics Association, 6, 6, 494-511. Published in 1998
- BMIR-1998-0734
- Modern Architectures for Intelligent Systems: Reusable
Ontologies and Problem-Solving Methods
- M. A. Musen
- 1998 AMIA Annual Symposium, Orlando, FL. Published in 1998
- BMIR-1998-0733
- Therapy Planning as Constraint Satisfaction: A
Computer-Based Antiretroviral Therapy Advisor for the Management of HIV
- S. Smith, J. Y. Park, M. A. Musen
- 1998 AMIA Annual Symposium, Orlando, FL. Published in 1998
- BMIR-1998-0726
- Integration of Temporal Reasoning and Temporal-Data Maintenance Into A Reusable Database Mediator to Answer Abstract, Time-Oriented Queries: The Tzolkin System
- J. H. Nguyen, Y. Shahar, S. W. Tu, A. K. Das, M. A. Musen
- Journal of Intelligent Information Systems, 13, 1/2, 121-145. Published in 1998
- BMIR-1998-0716
- A Declarative Explanation Framework That Uses A
Collection Of Visualization Agents
- R. D. Shankar, S. W. Tu, M. A. Musen
- AMIA Fall Symposium, Orlando, FL. Published in 1998
- BMIR-1998-0709
- Representation of Change in Controlled Medical Terminologies
- D. E. Oliver, Y. Shahar, E. H. Shortliffe, M. A. Musen
- Artificial Intelligence in Medicine, 15, 1, 53-76. Published in 1998
- BMIR-1997-0697
- Mappings for Reuse in Knowledge-based Systems
- J. Y. Park, J. Gennari, M. A. Musen
- . Published in 1997
- BMIR-1997-0696
- When Knowledge Models Collide (How it Happens and What
to Do)
- W. E. Grosso, J. Gennari, R. Fergerson, M. A. Musen
- . Published in 1997
- BMIR-1997-0695
- A Method-Description Language: An initial ontology with
examples
- J. Gennari, W. E. Grosso, M. A. Musen
- . Published in 1997
- BMIR-1997-0687
- Reuse, CORBA, and Knowledge-Based Systems
- J. Gennari, H. Cheng, R. B. Altman, M. A. Musen
- International Journal of Human-Computer Studies, 49, 4, 523-546. Published in 1997
- BMIR-1997-0681
- Domain Modeling for Integrated Ontologies: Principles
for Reconciliation and Reuse
- A. Advani, S. W. Tu, M. A. Musen
- . Published in 1997
- BMIR-1997-0677
- A Temporal Database Mediator For Protocol-Based Decision Support
- J. H. Nguyen, Y. Shahar, S. W. Tu, A. K. Das, M. A. Musen
- 1997 AMIA Annual Fall Symposium, Nashville, TN. Published in 1997
- BMIR-1997-0657
- Domain Ontologies in Software Engineering: Use of Protege
with the EON Architecture
- M. A. Musen
- Methods of Information in Medicine, 37, 540-550. Published in 1997
- BMIR-1996-0656
- The Road to Professionalism in Medical Informatics: The Role of Training
- M. A. Musen, E. A. Barnett
- Methods of Information in Medicine, 35, 2, 148-151. Published in 1996
- BMIR-1996-0651
- Handbook of Medical Informatics
- M. A. Musen
- . Published in 1996
- BMIR-1996-0648
- Ontologies and the Configuration of Problem-solving
Methods
- R. Studer, H. Eriksson, J. Gennari, S. W. Tu, D. Fensel, M. A. Musen
- 10th Banff Knowledge Acquisition for Knowledge-Based Systems Workshop, Banff, Canada. Published in 1996
- BMIR-1996-0647
- Episodic Refinement of Episodic Skeletal Plan Refinement
- S. W. Tu, M. A. Musen
- International Journal of Human-Computer Studies, 48, 475-497. Published in 1996
- BMIR-1996-0645
- Customizing Work Processes for Organization Models
- D. B. Fridsma, J. Gennari, M. A. Musen
- . Published in 1996
- BMIR-1996-0636
- Knowledge-Based Temporal Abstraction in Clinical Domains
- Y. Shahar, M. A. Musen
- Artificial Intelligence in Medicine, 8, 267-298. Published in 1996
- BMIR-1996-0631
- A Structure of Problem-solving Methods for Real-time
Decision Support: Modeling Approaches Using PROTEGE-II and KSM
- M. Molina, Y. Shahar, J. Cuena, M. A. Musen
- 10th Banff Knowledge Acquisition for Knowledge-Based Systems Workshop, Banff, Canada. Published in 1996
- BMIR-1996-0629
- Reuse for Knowledge-Based Systems and CORBA
Components
- J. Gennari, A. R. Stein, M. A. Musen
- 10th Banff Knowledge Acquisition for Knowledge-Based Systems Workshop, Banff, Canada. Published in 1996
- BMIR-1996-0620
- Development of a guideline authoring tool with
PROTEGE-II, based on the DILEMMA Generic Protocol and Guideline Model
- P. D. Johnson, M. A. Musen
- . Published in 1996
- BMIR-1996-0619
- Overcoming Temporal Mismatches in Clinical Databases
- A. K. Das, M. A. Musen
- . Published in 1996
- BMIR-1996-0618
- Making Generic Guidelines Site-Specific
- D. B. Fridsma, J. Gennari, M. A. Musen
- 1996 AMIA Annual Fall Symposium, Washington, D.C.. Published in 1996
- BMIR-1996-0616
- The EON Model of Intervention Protocols and Guidelines
- S. W. Tu, M. A. Musen
- 1996 AMIA Annual Fall Symposium, Washington, D.C.. Published in 1996
- BMIR-1996-0615
- Computer-Based Problem Lists in Clinical Settings: Conflict, Negotiation, and Compromise
- K. E. Wieckert, L. O'Malley, M. A. Musen
- . Published in 1996
- BMIR-1996-0614
- Knowledge Acquisition for Temporal Abstraction
- A. R. Stein, Y. Shahar, M. A. Musen
- 1996 AMIA Annual Fall Symposium, Washington, D.C.. Published in 1996
- BMIR-1996-0606
- EON: A Component-Based Approach to Automation of
- M. A. Musen, S. W. Tu, A. K. Das, Y. Shahar
- JAMIA, 3, 367-388. Published in 1996
- BMIR-1996-0605
- Modular Neural Networks for Medical Prognosis: Quantifying the Benefits of Combining Neural Networks for Survival Prediction
- L. Ohno-Machado, M. A. Musen
- . Published in 1996
- BMIR-1996-0604
- Sequential versus standard neural networks for temporal pattern recognition: An example using the domain of coronary heart disease
- L. Ohno-Machado, M. A. Musen
- . Published in 1996
- BMIR-1996-0602
- Conceptual and Formal Specifications of Problem-Solving Methods
- D. Fensel, H. Eriksson, R. Studer, M. A. Musen
- International Journal of Expert Systems, 9, 4, 507-532. Published in 1996
- BMIR-1995-1146
- An Intelligent Case-Adjustement Algorithm for the Automated Design of Population-Base Quality Auditing Protocols
- A. Advani, N. Jones, Y. Shahar, M. K. Goldstein, M. A. Musen
- Medinfo. Published in 1995
- BMIR-1995-0593
- Support for Information Management in Critical Care: A new approach to identify needs
- T. W. Rosenal, D. E. Forsythe, A. Seiver, M. A. Musen
- Nineteenth Annual Symposium on Computer Applications in Medical Care, New Orleans, LA. Published in 1995
- BMIR-1995-0591
- Computers in Clinical Practice
- B. Middleton, W. M. Detmer, M. A. Musen
- . Published in 1995
- BMIR-1995-0585
- A Comparison of the Temporal Expressiveness of Three Database Query Methods
- A. K. Das, M. A. Musen
- Nineteenth Annual Symposium on Computer Applications in Medical Care, New Orleans, LA. Published in 1995
- BMIR-1995-0583
- Computer-Based Screening of Patients with HIV/AIDS for Clinical-Trial Eligibility
- R. W. Carlson, S. W. Tu, N. M. Lane, T. L. Lai, C. A. Kemper, M. A. Musen
- Online Journal of Current Clinical Trials. Published in 1995
- BMIR-1995-0582
- The Development of a Controlled Medical Terminology:
- M. A. Musen, K. E. Wieckert, E. T. Miller, K. E. Campbell, L. M. Fagan
- MEDINFO '95: The Eighth World Congress on Medical Informatics, Vancouver, BC, Canada. Published in 1995
- BMIR-1995-0578
- Architectures for Intelligent Systems Based on Reusable Components
- M. A. Musen, A. T. Schreiber
- Artificial Intelligence in Medicine, 7, 189-199. Published in 1995
- BMIR-1995-0574
- A Rational Reconstruction of INTERNIST-I using
- M. A. Musen, J. Gennari, W. W. Wong
- Nineteenth Annual Symposium on Computer Applications in Medical Care, New Orleans, LA. Published in 1995
- BMIR-1995-0573
- A Web-Based Architecture for a Medical Vocabulary
Server
- J. Gennari, D. E. Oliver, W. Pratt, J. Rice, M. A. Musen
- Nineteenth Annual Symposium on Computer Applications in Medical Care, New Orleans, LA. Published in 1995
- BMIR-1995-0572
- A Comparison of Two Computer-Based Prognostic Systems
for AIDS
- L. Ohno-Machado, M. A. Musen
- Nineteenth Annual Symposium on Computer Applications in Medical Care, New Orleans, LA. Published in 1995
- BMIR-1995-0571
- Plan Recognition and Revision in Protocol-Based Care
- Y. Shahar, M. A. Musen
- Stanford, CA. Published in 1995
- BMIR-1995-0570
- The Separation of Reviewing Knowledge from Medical Knowledge
- J. van der Lei, M. A. Musen
- Methods of Information in Medicine, 34, 131-139. Published in 1995
- BMIR-1995-0566
- A Component-Based Architecture for Automation of Protocol-Directed Therapy
- M. A. Musen, S. W. Tu, A. K. Das, Y. Shahar
- Fifth Conference on Artificial Intelligence in Medicine Europe, AIME '95, Pavia, Italy. Published in 1995
- BMIR-1995-0561
- Knowledge-Based Temporal Abstraction in Clinical
Domains
- Y. Shahar, M. A. Musen
- . Published in 1995
- BMIR-1994-0551
- Custom-Tailored Development Tools for Knowledge-Based
Systems
- H. Eriksson, A. R. Puerta, J. Gennari, T. E. Rothenfluh, S. W. Tu, M. A. Musen
- . Published in 1994
- BMIR-1994-0549
- Reuse with Protege-II: From Elevators to Ribosomes
- J. Gennari, R. B. Altman, M. A. Musen
- ACM-SigSoft 1995 Symposium on Software Reusability, Seattle, WA. Published in 1994
- BMIR-1994-0548
- Plan Recognition and Revision in Support of Guideline-Based Care
- Y. Shahar, M. A. Musen
- AAAI Spring Symposium on Representing Mental States and Mechanisms, Stanford, CA. Published in 1994
- BMIR-1994-0545
- PROTEGE II: Computer Support For Development Of Intelligent Systems From Libraries Of Components
- M. A. Musen, J. Gennari, H. Eriksson, S. W. Tu, A. R. Puerta
- MEDINFO 95, The Eighth World Congress on Medical Informatics, Vancouver, B.C., Canada. Published in 1994
- BMIR-1994-0542
- Hierarchical Neural Networks for Survival Analysis
- L. Ohno-Machado, M. G. Walker, M. A. Musen
- MEDINFO 95, The Eighth World Congress on Medical Informatics, Vancouver, BC, Canada. Published in 1994
- BMIR-1994-0541
- Knowledge-Based Temporal Abstraction in Diabetes Therapy
- Y. Shahar, A. K. Das, S. W. Tu, F. B. Kraemer, L. Basso, M. A. Musen
- MEDINFO 95, The Eighth World Congress on Medical Informatics, Vancouver, B.C., Canada. Published in 1994
- BMIR-1994-0539
- Model-Based Generation of User Interfaces
- A. R. Puerta, H. Eriksson, J. Gennari, M. A. Musen
- National Conference on Artificial Intelligence (AAAI'94), Seattle, WA. Published in 1994
- BMIR-1994-0527
- Knowledge-Based Temporal Abstraction for Diabetic Monitoring
- Y. Shahar, A. K. Das, S. W. Tu, F. B. Kraemer, M. A. Musen
- Eighteenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1994
- BMIR-1994-0523
- Development of a Controlled Medical Terminology: Knowledge
Acquisition and Knowledge Representation
- , K. E. Wieckert, E. T. Miller, K. E. Campbell, L. M. Fagan, M. A. Musen
- Methods of Information in Medicine, 34, 85-95. Published in 1994
- BMIR-1994-0521
- A Temporal-Abstraction Mediator for Protocol-Based Decision-Support Systems
- A. K. Das, Y. Shahar, S. W. Tu, M. A. Musen
- Eighteenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1994
- BMIR-1994-0520
- Ontology-Based Configuration of Problem-Solving Methods and
Generation of Knowledge-Acquisition Tools: Application of PROTEGE-II to Protocol-Based Decision Support
- S. W. Tu, H. Eriksson, J. Gennari, Y. Shahar, M. A. Musen
- Artificial Intelligence in Medicine, 7, 257-289. Published in 1994
- BMIR-1994-0519
- A computer-based approach to quality improvement for telephone triage in a community AIDS clinic
- S. B. Henry, D. Borchelt, J. G. Schreiner, M. A. Musen
- Nursing Administration Quarterly, 18, 2, 65-73. Published in 1994
- BMIR-1994-0517
- Temporal abstraction mechanisms as KADS inferences
- M. Aben, Y. Shahar, M. A. Musen
- 8th Banff Knowledge Acquisition for Knowledge-Based Systems Workshop, Banff, Alberta, Canada. Published in 1994
- BMIR-1994-0512
- Knowledge-Based Temporal Abstraction in Clinical-Management Tasks
- Y. Shahar, A. K. Das, S. W. Tu, M. A. Musen
- AAAI Spring Symposium on Artificial Intelligence in Medicine, Stanford, CA. Published in 1994
- BMIR-1994-0511
- A Logical Foundation for Representation of Clinical Data
- K. E. Campbell, A. K. Das, M. A. Musen
- Journal of the American Medical Informatics Association, 1, 3, 218-232. Published in 1994
- BMIR-1994-0496
- Generation of Knowledge-Acquisition Tools from Domain
Ontologies
- H. Eriksson, A. R. Puerta, M. A. Musen
- International Journal of Human-Computer Studies, 41, 425-453. Published in 1994
- BMIR-1993-0509
- The Representation and Manipulation of Temporal Data for Clinical Decision-Support Systems: A Database Challenge
- A. K. Das, S. W. Tu, M. A. Musen
- . Published in 1993
- BMIR-1993-0507
- Hierarchical Neural Networks for Partial Diagnosis in
Medicine
- L. Ohno-Machado, M. A. Musen
- World Congress on Neural Networks, San Diego, CA. Published in 1993
- BMIR-1993-0502
- Reusable Ontologies, Knowledge-Acquisition Tools, and
Performance Systems: PROTEGE-II Solutions to Sisyphus-2
- T. E. Rothenfluh, J. Gennari, H. Eriksson, A. R. Puerta, S. W. Tu, M. A. Musen
- 8th Banff Knowledge Acquisition for Knowledge-Based Workshop, Banff, Alberta. Published in 1993
- BMIR-1993-0501
- Toward Ontology-Based Frameworks for
Knowledge-Acquisition Tools
- A. R. Puerta, R. Neches, H. Eriksson, P. Szekely, P. Luo, M. A. Musen
- Eighth Banff Knowledge-Based Systems Workshop, Banff, Alberta, Canada. Published in 1993
- BMIR-1993-0500
- Beyond Data Models for Automated User Interface
Generation
- A. R. Puerta, H. Eriksson, J. Gennari, M. A. Musen
- HCI'94, People and Computers, The University of Glasgow. Published in 1993
- BMIR-1993-0497
- Mapping Domains to Methods in Support of Reuse
- J. Gennari, S. W. Tu, T. E. Rothenfluh, M. A. Musen
- International Journal of Human-Computer Studies, 41, 399-424. Published in 1993
- BMIR-1993-0494
- T-Helper I: An electronic medical record supporting the treatment of AIDS
- M. A. Musen, J. G. Schreiner, K. E. Campbell, S. W. Tu, E. H. Shortliffe, L. M. Fagan
- Seventeenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1993
- BMIR-1993-0491
- PROTEGE-II: An Environment for Reusable Problem-Solving Methods and Domain Ontologies
- M. A. Musen, S. W. Tu, H. Eriksson, J. Gennari, A. R. Puerta
- International Joint Conference on Artificial Intelligence, Chambery, Savoie, France. Published in 1993
- BMIR-1993-0483
- Graph-Grammar Assistance for Automated Generation of Influence Diagrams
- J. W. Egar, M. A. Musen
- IEEE Transactions on Systems, Man, and Cybernetics, 24, 11, 1625-1642. Published in 1993
- BMIR-1993-0479
- Response of general practitioners to computer-generated critiques of hypertension therapy
- J. van der Lei, E. V. Does, A. J. Veld, J. H. Bemmel, M. A. Musen
- Methods of Information in Medicine, 32, 146-153. Published in 1993
- BMIR-1993-0478
- Metatools for knowledge acquisition
- H. Eriksson, M. A. Musen
- IEEE Software, 23-29. Published in 1993
- BMIR-1993-0477
- There's no theory better than that of a practical tool
- M. A. Musen
- The Knowledge Engineering Review, 8, 1, 1-4. Published in 1993
- BMIR-1993-0476
- Architectures for architects
- M. A. Musen
- Methods of Information in Medicine, 32, 12-13. Published in 1993
- BMIR-1993-0475
- Knowledge Reuse: Temporal Abstraction Mechanisms for the Assessment of Children's Growth
- M. Kuilboer, Y. Shahar, D. M. Wilson, M. A. Musen
- Seventeenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1993
- BMIR-1993-0474
- A Temporal Query System for Protocol-Directed Decision Support
- A. K. Das, M. A. Musen
- Methods of Information in Medicine, 33, 4, 358-370. Published in 1993
- BMIR-1993-0472
- Potential Accrual of Patients to Prospective Clinical Trials
- R. W. Carlson, S. W. Tu, N. M. Lane, T. L. Lai, C. A. Kemper, E. H. Shortliffe, M. A. Musen
- . Published in 1993
- BMIR-1993-0469
- AIDS2: A Decision-Support Tool for Decreasing Physicians' Uncertainty Regarding Patient Eligibility for HIV Treatment Protocols
- L. Ohno-Machado, E. Parra, S. B. Henry, S. W. Tu, M. A. Musen
- Seventeenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1993
- BMIR-1993-0468
- Automated Modeling of Medical Decisions
- J. W. Egar, M. A. Musen
- Seventeenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1993
- BMIR-1993-0467
- A Computer-Based Tool for Generation of Progress Notes
- K. E. Campbell, K. E. Wieckert, L. M. Fagan, M. A. Musen
- Seventeenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1993
- BMIR-1993-0463
- Graph-Grammar Assistance for Automated Generation of Influence Diagrams
- J. W. Egar, M. A. Musen
- Ninth Conference on Uncertainty in Artificial Intelligence, Washington, DC. Published in 1993
- BMIR-1993-0459
- A Framework for Acquiring Temporal-Abstraction Knowledge
- Y. Shahar, M. Aben, M. A. Musen
- . Published in 1993
- BMIR-1992-0457
- RESUME: A Temporal-Abstraction System for Patient Monitoring
- Y. Shahar, M. A. Musen
- Computers and Biomedical Research, 26, 255-273. Published in 1992
- BMIR-1992-0454
- Generation of Knowledge-Acquisition Tools from Reusable
Domain Ontologies
- A. R. Puerta, H. Eriksson, J. W. Egar, M. A. Musen
- . Published in 1992
- BMIR-1992-0453
- A Methodology for Determining Patients' Eligibility for
Clinical Trials
- S. W. Tu, C. A. Kemper, N. M. Lane, R. W. Carlson, M. A. Musen
- Methods of Information in Medicine, 32, 317-325. Published in 1992
- BMIR-1992-0444
- The New World of Mechanisms
- A. R. Puerta, S. W. Tu, M. A. Musen
- Fifth International Symposium on Knowledge Engineering, Seville, Spain. Published in 1992
- BMIR-1992-0442
- Second General Expert Systems
- M. A. Musen
- . Published in 1992
- BMIR-1992-0441
- User-Interface Design Based on Data Models for Application Programs
- H. Eriksson, A. R. Puerta, M. A. Musen
- . Published in 1992
- BMIR-1992-0438
- A Needs Analysis for Computer-Based Telephone Triage in a Community AIDS Clinic
- S. B. Henry, J. G. Schreiner, D. Borchelt, M. A. Musen
- Sixteenth Annual Symposium on Computer Applications in Medical Care. Published in 1992
- BMIR-1992-0437
- Plug-and-Play: Construction of Task-Specific
Expert-System Shells Using Sharable Context Ontologies
- E. Walther, H. Eriksson, M. A. Musen
- AAAI Workshop on Knowledge Representation Aspects of Knowledge Acquisition, San Jose, CA. Published in 1992
- BMIR-1992-0434
- Task Modeling with Reusable Problem-Solving Methods
- H. Eriksson, Y. Shahar, S. W. Tu, A. R. Puerta, M. A. Musen
- Artificial Intelligence, 79, 2, 293-326. Published in 1992
- BMIR-1992-0433
- Graph-Grammar Assistance for Modeling of Decisions
- J. W. Egar, A. R. Puerta, M. A. Musen
- Proceedings of the Seventh Banff Knowledge Acquisition for Knowledge-Based Systems Workshop, Banff, Alberta. Published in 1992
- BMIR-1992-0432
- Protocol-Based Therapy Management for Graft-Versus-Host
Disease
- S. W. Tu, Y. Shahar, M. A. Musen
- AAAI Spring Symposium on Artificial Intelligence in Medicine, Stanford, CA. Published in 1992
- BMIR-1992-0430
- Use of KADS to Create a Conceptual Model of the ONCOCIN Task
- M. Linster, M. A. Musen
- Knowledge Acquisition, 4, 55-87. Published in 1992
- BMIR-1992-0428
- Knowledge Acquisition as a Modeling Activity
- A. R. Puerta, S. W. Tu, M. A. Musen
- . Published in 1992
- BMIR-1992-0427
- Conceptual Models for Automatic Generation of Knowledge-Acquisition Tools
- H. Eriksson, M. A. Musen
- Knowledge Engineering Review, 8, 27-47. Published in 1992
- BMIR-1992-0420
- An Extended SQL for Temporal Data Management in Clinical Decision-Support Systems
- A. K. Das, S. W. Tu, G. P. Purcell, M. A. Musen
- Sixteenth Annual Symposium on Computer Applications in Medical Care, Baltimore, MD. Published in 1992
- BMIR-1992-0418
- A Problem-Solving Architecture for Managing Temporal Data and Their Abstractions
- Y. Shahar, S. W. Tu, A. K. Das, M. A. Musen
- AAAI Workshop on Implementing Temporal Reasoning, National Conference on Artificial Intelligence (AAAI-92), San Jose, CA. Published in 1992
- BMIR-1992-0413
- Graph-Grammar Productions for the Modeling of Medical Dilemmas
- J. W. Egar, M. A. Musen
- Sixth Annual Symposium on Computer Applications in Medical Care, Washington, D.C.. Published in 1992
- BMIR-1992-0412
- A Temporal-Abstraction System for Patient Monitoring
- Y. Shahar, M. A. Musen
- Sixth Annual Symposium on Computer Applications in Medical Care, Washington, D.C.. Published in 1992
- BMIR-1992-0411
- Representation of Clinical Data Using SNOMED III and Conceptual Graphs
- K. E. Campbell, M. A. Musen
- Sixteenth Annual Symposium on Computer Applications in Medical Care, Washington, D.C.. Published in 1992
- BMIR-1992-0408
- T-HELPER: Automated Support for Community-Based Clinical Research
- M. A. Musen, R. W. Carlson, L. M. Fagan, S. C. Deresinski
- Sixteenth Annual Symposium on Computer Applications in Medical Care, Washington, D.C.. Published in 1992
- BMIR-1992-0406
- Using Temporal-Abstraction Mechanisms for Patient Monitoring
- Y. Shahar, S. W. Tu, M. A. Musen
- AAAI Spring Symposium on AI in Medicine, Stanford, CA. Published in 1992
- BMIR-1992-0404
- Overcoming the limitations of role-limiting models
- M. A. Musen
- Knowledge Acquisition, 4, 2, 165-170. Published in 1992
- BMIR-1991-0403
- A Historical Relational Data Model for Managing Temporal Data
- A. K. Das, S. W. Tu, M. A. Musen
- . Published in 1991
- BMIR-1991-0398
- Dimensions of Knowledge Sharing and Reuse
- M. A. Musen
- Computers and Biomedical Research, 25, 435-467. Published in 1991
- BMIR-1991-0395
- Automated Generation of Knowledge-Acquisition Tools
with Mecano
- A. R. Puerta, J. W. Egar, M. A. Musen
- . Published in 1991
- BMIR-1991-0394
- Comparison of computer-aided and human review of general practitioners' management of hypertension
- J. van der Lei, E. V. Does, A. J. Veld, J. H. Bemmel, M. A. Musen
- Lancet, 338, 1504-1508. Published in 1991
- BMIR-1991-0393
- A Problem-Solving Model for Protocol-Based Care: From e-ONCOCIN to EON
- M. A. Musen, S. W. Tu, Y. Shahar
- MEDINFO 92, Palexpo Geneva, Switzerland. Published in 1991
- BMIR-1991-0392
- Creation of a Systematic Domain for Medical Care: The need for a Comprehensive Patient-Description Vocabulary
- K. E. Campbell, M. A. Musen
- MEDINFO 92, Palexpo Geneva, Switzerland. Published in 1991
- BMIR-1991-0391
- Diagrammatic Acquisition of Medical Information for Clinical Trials
- J. W. Egar, A. R. Puerta, M. A. Musen
- MEDINFO 92, Palexpo Geneva, Switzerland. Published in 1991
- BMIR-1991-0367
- A Multiple-Method Knowledge-Acquisition Shell for the
Automatic Generation of Knowledge-Acquisition Tools
- A. R. Puerta, J. W. Egar, S. W. Tu, M. A. Musen
- Sixth Workshop on Knowledge Acquisition for Knowledge-Based Systems, Banff, Alberta. Published in 1991
- BMIR-1991-0365
- Knowledge Acquisition for Temporal-Abstraction Mechanisms
- Y. Shahar, S. W. Tu, M. A. Musen
- Sixth Workshop on Knowledge Acquisition for Knowledge-Based Systems, Banff, Alberta. Published in 1991
- BMIR-1991-0364
- A Problem-Solving Model for Episodic Skeletal-Plan
Refinement
- S. W. Tu, Y. Shahar, J. Dawes, J. Winkles, A. R. Puerta, M. A. Musen
- Sixth Workshop on Knowledge Acquisition for Knowledge-Based Systems, Banff, Alberta. Published in 1991
- BMIR-1991-0361
- A Model for Critiquing Based on Automated Medical Records
- J. van der Lei, M. A. Musen
- Computers and Biomedical Research, 24, 344-378. Published in 1991
- BMIR-1991-0357
- Knowledge-Priented Software
- M. A. Musen
- . Published in 1991
- BMIR-1990-0345
- Critiquing physician decision making using data from automated medical records: Assessing the limitations
- J. van der Lei, E. V. Does, A. J. Veld, M. A. Musen
- Fourteenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1990
- BMIR-1989-0278
- The Strained Quality of Medical Data
- M. A. Musen
- Methods of Information in Medicine, 28, 123-125. Published in 1989
- BMIR-1989-0257
- Knowledge Engineering for Clinical Consultation Programs: Modeling the Application Area
- M. A. Musen, J. van der Lei
- Methods of Information in Medicine, 28, 28-35. Published in 1989
- BMIR-1989-0256
- Automated Support for Building and Extending Expert Models
- M. A. Musen
- Machine Learning, 4, 349-377. Published in 1989
- BMIR-1989-0244
- Widening the Knowledge-Acquisition Bottleneck: Automated Tools for Building and Extending Clinical Methods
- M. A. Musen
- AAMSI Congress 1989, San Francisco, CA. Published in 1989
- BMIR-1989-0242
- Languages for Knowledge Acquisition: Building and Extending Models
- M. A. Musen
- AAAI Spring Symposium on Knowledge System Development Tools and Languages, Stanford, CA. Published in 1989
- BMIR-1988-0235
- Visual Languages and Applications
- M. A. Musen
- . Published in 1988
- BMIR-1988-0218
- Pattern Recognition and Artificial Intelligence: Towards an Integration of Techniques
- M. A. Musen, J. van der Lei
- . Published in 1988
- BMIR-1988-0217
- From expert models to expert systems: Translation of an intermediate knowledge representation
- D. M. Combs, S. W. Tu, L. M. Fagan, M. A. Musen
- Integration of Knowledge Acquisition and Performance Systems Workshop, St. Paul, MN. Published in 1988
- BMIR-1988-0214
- An editor for the conceptual models of interactive knowledge-acquisition tools
- M. A. Musen
- International Journal of Man-Machine Studies, 31, 673-698. Published in 1988
- BMIR-1988-0206
- Generation of Knowledge-Acquisition Tools from Clinical-Trial Models
- M. A. Musen
- Medical Informatics Europe Ô88, Oslo, Norway. Published in 1988
- BMIR-1988-0205
- Conceptual Models of Interactive Knowledge- Acquisition Tools
- M. A. Musen
- Knowledge Acquisition, 1, 73-88. Published in 1988
- BMIR-1987-0221
- Episodic Skeletal-Plan Refinement Based on Temporal Data
- S. W. Tu, M. G. Kahn, J. C. Ferguson, E. H. Shortliffe, L. M. Fagan, M. A. Musen
- Communications of the ACM, 32, 12, 1439-1455. Published in 1987
- BMIR-1986-0155
- OPAL: Toward the Computer-Aided Design of Oncology Advice Systems
- M. A. Musen, D. M. Combs, J. D. Walton, E. H. Shortliffe, L. M. Fagan
- Tenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1986
- BMIR-1986-0147
- Use of a domain model to drive an interactive knowledge-editing tool
- M. A. Musen, L. M. Fagan, D. M. Combs, E. H. Shortliffe
- International Journal of Man-Machine Studies, 26, 1, 105-121. Published in 1986
- BMIR-1986-0137
- Facilitating Knowledge Entry for an Oncology Therapy Advisor Using a Model of the Application Area
- M. A. Musen, L. M. Fagan, D. M. Combs, E. H. Shortliffe
- MEDINFO 86, Washington, DC. Published in 1986
- BMIR-1985-0133
- Graphical entry of procedural and inferential knowledge
- D. M. Combs, L. M. Fagan, E. H. Shortliffe, M. A. Musen
- Proceedings AAMSI Congress 1986, Anaheim, CA. Published in 1985
- BMIR-1985-0131
- Expert Systems: The User Interface
- M. A. Musen, L. M. Fagan, E. H. Shortliffe
- . Published in 1985
- BMIR-1985-0129
- Knowledge engineering for a clinical trial advice system: Uncovering errors in protocol specification
- M. A. Musen, J. A. Rohn, L. M. Fagan, E. H. Shortliffe
- Bulletin du Cancer, 74, 291-296. Published in 1985
- BMIR-1985-0114
- Graphical access to medical expert systems: III. Design of a knowledge-acquisition environment
- J. D. Walton, D. M. Combs, C. D. Lane, E. H. Shortliffe, L. M. Fagan, M. A. Musen
- Methods of Information in Medicine, 26, 78-88. Published in 1985
- BMIR-1985-0113
- Rationale for knowledge base redesign in a medical advice system
- M. A. Musen, C. P. Langlotz, L. M. Fagan, E. H. Shortliffe
- Proceedings AAMSI Congress 1985, San Francisco, CA. Published in 1985
|