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Publications by Russ B. Altman, M.D., Ph.D.
There are 157 publications that list Russ B. Altman as an author.
- BMIR-2007-1313
- Extracting subject demographic information from abstracts of randomized clinical trial reports.
- R. Xu, Y. Garten, K. S. Supekar, A. K. Das, R. B. Altman, A. M. Garber
- MEDINFO, Brisbane, Australia, 550-4. Published in 2007
- BMIR-2005-1267
- Using Petri Net tools to study properties and dynamics of biological systems
- M. Peleg, D. L. Rubin, R. B. Altman
- J Am Med Inform Assoc., JAMIA, 12, 181–199. Published in 2005
- BMIR-2005-1162
- Protecting Privacy of Human Subjects (Letters)
- R. B. Altman, Z. Lin, A. B. Owen
- Science. Published in 2005
- BMIR-2005-1161
- Choosing SNPs Using Feature Selection
- T. M. Phuong, Z. Lin, R. B. Altman
- Proceeding IEEE System Bioinformatics Conference. Published in 2005
- BMIR-2005-1160
- Structural Characterization of Proteins Using Residue Environments
- S. D. Mooney, M. Liang, R. Deconde, R. B. Altman
- Protein. Published in 2005
- BMIR-2005-1085
- A statistical approach to scanning the biomedical literature for pharmacogenetics knowledge
- D. L. Rubin, C. F. Thorn, T. E. Klein, R. B. Altman
- J Am Med Inform Assoc, JAMIA, 12, 2, 121-129. Published in 2005
- BMIR-2005-1024
- Editorial: Annual progress in bioinformatics
- R. B. Altman
- Briefings in Bioinformatics, 6, 1, 4-5. Published in 2005
- BMIR-2004-1165
- Eukaryotic Regulatory Element Conservation Analysis and Identification Using Comparative Genomics
- I. Liu, X. S. Liu, L. Wei, R. B. Altman, S. Batzoglou
- Genome Resource. Published in 2004
- BMIR-2004-1164
- Point of View: Approaches for Protecting Privacy in the Genomic Era
- Z. Lin, A. B. Owen, R. B. Altman
- Genetic Engineering News. Published in 2004
- BMIR-2004-1061
- A resource to acquire and summarize pharmacogenetics knowledge in the literature.
- D. L. Rubin, M. Carillo, M. Woon, J. F. Conroy, T. E. Klein, R. B. Altman
- Medinfo, Bried Bioinform, 11, 2, 793-7. Published in 2004
- BMIR-2004-1058
- Building Successful Biological Databases
- R. B. Altman
- Brief Bioinformatics, Bried Bioinform, 5, 1, 4-5. Published in 2004
- BMIR-2004-1056
- Tools for loading MEDLINE into a local relational database
- D. E. Oliver, G. Bhalotia, A. S. Schwartz, R. B. Altman, M. A. Hearst
- BMC Bioinformatics, 5, 146. Published in 2004
- BMIR-2004-1027
- Extracting and characterizing gene-drug relationships from the literature
- J. T. Chang, R. B. Altman
- Pharmacogenetics, 14, 9, 577-586. Published in 2004
- BMIR-2004-1025
- SAFA: semi-automated footprinting analysis software for high-throughput quantification of nucleic acid footprinting experiments.
- R. Das, A. Laederach, S. M. Pearlman, D. Herschlag, R. B. Altman
- RNA, 11, 3, 344-354. Published in 2004
- BMIR-2004-1023
- Finding haplotype tagging SNPs by use of principal components analysis.
- Z. Lin, R. B. Altman
- The American Journal of Human Genetics, Am J Hum Genet, 75, 850-861. Published in 2004
- BMIR-2004-1010
- Genomic research and human subject privacy
- Z. Lin, A. B. Owen, R. B. Altman
- Science, 305, 5681, 183. Published in 2004
- BMIR-2004-1005
- Computational Analysis of Plasmodium falciparum Metabolism: Organizing Genomic Information to Facilitate Drug Discovery
- I. Yeh, T. Hanekamp, S. Tsoka, P. Karp, R. B. Altman
- Genome Resources, Genome Res., April 12, 2004, epub ahead of print. Published in 2004
- BMIR-2004-0995
- Using surface envelopes for discrimination of molecular models
- J. M. Dugan, R. B. Altman
- Protien Science, 13, January 2004, 15-24. Published in 2004
- BMIR-2004-0993
- GAPSCORE: finding gene and protein names one word at a time
- J. T. Chang, H. Schutze, R. B. Altman
- Bioinformatics, Vol.20 no.2, January 22, 216-225. Published in 2004
- BMIR-2004-0982
- Eukaryotic regulatory element conservation analysis and identification using comparative genomics
- I. Liu, X. S. Liu, L. Wei, R. B. Altman, S. Batzoglou
- Genome Resource, 3, March 14, 2004, 451-458. Published in 2004
- BMIR-2004-0981
- Training the Next Generation of Informaticians: The Impact of 'BISTI' and Bioinformatics; A Report from the American College of Medical Informatics
- C. P. Friedman, R. B. Altman, I. S. Kohane, K. A. McCormick, P. L. Miller, J. G. Ozbolt, E. H. Shortliffe, G. D. Stormo, M. C. Szczepaniak, D. Tuck, J. Williamson
- Journal of American Medical Informatics Association, JAMIA, Feb 2004. Published in 2004
- BMIR-2003-1166
- A Personlized and AUtomated dbSNP Surveillance System
- S. Liu, S. Lin, M. Woon, T. E. Klein, R. B. Altman
- CSB. Published in 2003
- BMIR-2003-1009
- Fundamental tensions between genomic research and human subject privacy
- Z. Lin, A. B. Owen, R. B. Altman
- . Published in 2003
- BMIR-2003-1001
- Defining bioinformatics and structural bioinformatics
- R. B. Altman, J. M. Dugan
- Methods of Biochemical Analysis, Methods Biochem Anal, 44, April 2003, 3-14. Published in 2003
- BMIR-2003-1000
- Complexities of managing biomedical information
- R. B. Altman
- OMICS, 1, Spring 7, 2003, 127-129. Published in 2003
- BMIR-2003-0999
- Genetic sequence data for pharmacogenomics
- R. B. Altman
- Current Opinion in Drug Discovery & Development, 3, May 6,2003, 297-303. Published in 2003
- BMIR-2003-0998
- The computational analysis of scientific literature to define and recognize gene expression clusters
- S. Raychaudhuri, J. T. Chang, F. Imam, R. B. Altman
- Nucleic Acids Research, 31, August 1, 2003, 4553-4560. Published in 2003
- BMIR-2003-0997
- Investigating hypoxic tumor physiology through gene expression patterns
- N. C. Denko, L. A. Fontana, K. M. Hudson, P. D. Sutphin, S. Raychaudhuri, R. B. Altman, A. J. Giaccia
- Oncogene, 22, September 1, 2003, 5907-5914. Published in 2003
- BMIR-2003-0989
- Knowledge acquisition, consistency checking and concurrency control for Gene Ontology (GO)
- I. Yeh, P. Karp, N. F. Noy, R. B. Altman
- Bioinformatics, 2, January 22, 241-8. Published in 2003
- BMIR-2003-0988
- Indexing pharmacogenetic knowledge on the World Wide Web
- R. B. Altman, D. A. Flockhart, S. T. Sherry, D. E. Oliver, D. L. Rubin, T. E. Klein
- Pharmacogenetics, 13, 1, 3-5. Published in 2003
- BMIR-2003-0987
- A literature-based method for assessing the functional coherence of a gene group
- S. Raychaudhuri, R. B. Altman
- Bioinfomatics, 3, February 12, 2003, 396-401. Published in 2003
- BMIR-2003-0986
- A functional analysis of disease-associated mutations in the androgen receptor gene
- S. D. Mooney, T. E. Klein, R. B. Altman, M. A. Trifiro, B. Gottlieb
- Nucleic Acids Research, 31, April 2003, e42. Published in 2003
- BMIR-2003-0985
- WebFEATURE: An interactive web tool for identifying and visualizing functional sites on macromolecular structures
- M. Liang, D. R. Banatao, T. E. Klein, D. Brutlag, R. B. Altman
- Nucleic Acids Research, 13, July 1, 2003, 3324-3327. Published in 2003
- BMIR-2003-0984
- A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae)
- O. G. Troyanskaya, K. Dolinski, A. B. Owen, R. B. Altman, D. Botstein
- Proceedings of the National Academy of Sciences, PNAS, 14, July 1, 2003, 8348-8353. Published in 2003
- BMIR-2003-0983
- Microenvironment analysis and identification of magnesium
- D. R. Banatao, R. B. Altman, T. E. Klein
- Nucleic Acids Research, 31, August 1, 2003, 4450-4460. Published in 2003
- BMIR-2003-0974
- Ribosomal Dynamics Inferred from Variations in Experimental
Measurements
- I. S. Gabashvili, M. Whirl-Carrillo, M. Bada, D. R. Banatao, R. B. Altman
- RNA, 9, 2003, 1301-1307. Published in 2003
- BMIR-2003-0969
- Large scale study of protein domain distribution in the
context of alternative splicingthe context of alternative splicing
- S. Liu, R. B. Altman
- Nucleic Acids Research, 31, 16, 4828-4835. Published in 2003
- BMIR-2003-0963
- Identification of Promoter Regions in the Human Genome by
Using a Retroviral Plasmid Library-Based Functional Reporter Gene Assay
- S. Khambata-Ford, I. Liu, C. Gleason, M. Dickson, R. B. Altman, S. Batzoglou, R. M. Myers
- Genome Research, 13, 7, 1765-1774. Published in 2003
- BMIR-2003-0959
- RECOGNIZING COMPLEX, ASYMMETRIC FUNCTIONAL SITES IN PROTEIN
STRUCTURES USING A BAYESIAN SCORING FUNCTION
- L. Wei, R. B. Altman
- Journal of Bioinformatics and Computational Biology, 1, 119-138. Published in 2003
- BMIR-2003-0951
- Automated Construction of Structural Motifs for
Predicting Functional Sites on Protein Structure
- M. Liang, D. Brutlag, R. B. Altman
- . Published in 2003
- BMIR-2002-1066
- Ontology development for a pharmacogenetics knowledge base.
- D. E. Oliver, D. L. Rubin, M. Hewett, T. E. Klein, R. B. Altman
- Pac Symp Biocomput, 65-76. Published in 2002
- BMIR-2002-1065
- Automating data acquisition into ontologies from pharmacogenetics relational data sources using declarative object definitions and XML
- D. L. Rubin, M. Hewett, D. E. Oliver, T. E. Klein, R. B. Altman
- Pac Symp Biocomput, 88-99. Published in 2002
- BMIR-2002-1002
- Promises of text processing: natural language processing meets AI
- J. T. Chang, R. B. Altman
- Drug Discovery Today, Drug Discov Today, 19, October 1, 2002, 992-993. Published in 2002
- BMIR-2002-0991
- Representing genetic sequence data for pharmacogenomics: an evolutionary approach using ontological and relational models
- D. L. Rubin, F. Shafa, D. E. Oliver, M. Hewett, R. B. Altman
- Bioinformatics, 18, Suppl 1, 207-15. Published in 2002
- BMIR-2002-0990
- Nonparametric methods for identifying differentially expressed genes in microarray data
- O. G. Troyanskaya, M. E. Garber, P. O. Brown, D. Botstein, R. B. Altman
- Bioinformtics, 11, November, 2002, 1454-61. Published in 2002
- BMIR-2002-0950
- RNAML: A Standard Syntax for Exchanging RNA
Informatio
- A. Waugh, P. Gendron, R. B. Altman, J. W. Brown, D. Case, D. Gautheret, S. C. Harvey, N. Leontis, J. Westbrook
- . Published in 2002
- BMIR-2002-0949
- Using Binning to Maintain Confidentiality of Medical
Data
- Z. Lin, M. Hewett, R. B. Altman
- . Published in 2002
- BMIR-2002-0948
- Using Text Analysis to Identify Functionally Coherent
Gene Groups
- S. Raychaudhuri, H. Schutze, R. B. Altman
- . Published in 2002
- BMIR-2002-0939
- Creating an Online Dictionary of Abbreviations from
MEDLINE
- J. T. Chang, H. Schutze, R. B. Altman
- . Published in 2002
- BMIR-2002-0938
- Emerging Scientific Applications in Data Mining
- J. Han, R. B. Altman, V. Kumar, H. Mannila, D. Pregibon
- . Published in 2002
- BMIR-2002-0934
- Promises of Text Processing: Where Natural Language
Processing Meets Artificial Intelligence
- J. T. Chang, R. B. Altman
- . Published in 2002
- BMIR-2002-0932
- Determining the Genomic Locations of Repetitive DNA
Sequenceswith a Whole-Genome Microarray: IS<i>6110 in Mycobacterium tuberculosis</i>
- M. Kivi, X. S. Liu, S. Raychaudhuri, R. B. Altman, P. M. Small
- . Published in 2002
- BMIR-2002-0930
- Mining biochemical information: Lessons taught by the
ribosome
- I. S. Gabashvili, M. Whirl-Carrillo, M. Bada, D. R. Banatao, R. B. Altman
- RNA (2002), 3, 279-289. Published in 2002
- BMIR-2002-0928
- Qualitative models of molecular function: linking genetic polymorphisms of tRNA to their functional sequelae
- M. Peleg, I. S. Gabashvili, R. B. Altman
- Proceedings of the IEEE, 92, 12, 1875-1886. Published in 2002
- BMIR-2002-0920
- Modeling Biological Processes using Workflow and Petri
Net Model
- M. Peleg, I. Yeh, R. B. Altman
- . Published in 2002
- BMIR-2002-0919
- Integrating Genotype and Phenotype Information: An
- T. E. Klein, J. T. Chang, M. K. Cho, K. L. Easton, R. Fergerson, M. Hewett, Z. Lin, I. Liu, S. Liu, D. E. Oliver, D. L. Rubin, F. Shafa, J. M. Stuart, R. B. Altman
- . Published in 2002
- BMIR-2002-0914
- Associating Genes with Gene Ontology Codes Using a
Maximum Entropy Analysis of Biomedical Literature. Genome Research, 1, 203-21
- S. Raychaudhuri, J. T. Chang, P. D. Sutphin, R. B. Altman
- . Published in 2002
- BMIR-2002-0913
- Challenges for Intelligent Systems in Biology
- R. B. Altman
- . Published in 2002
- BMIR-2002-0910
- PharmGKB: the Pharmacogenetics Knowledge Base
- M. Hewett, D. E. Oliver, D. L. Rubin, K. L. Easton, J. M. Stuart, R. B. Altman, T. E. Klein
- Nucleic Acids Res, 30, 1, 163-165. Published in 2002
- BMIR-2001-1269
- Integrating genotype and phenotype information: an overview of the PharmGKB project. Pharmacogenetics Research Network and Knowledge Base.
- T. E. Klein, J. T. Chang, M. K. Cho, K. L. Easton, R. Fergerson, M. Hewett, Z. Lin, I. Liu, S. Liu, D. E. Oliver, D. L. Rubin, F. Shafa, J. M. Stuart, R. B. Altman
- The Pharmacogenomics Journal, Pharmacogenomics J, 1, 3, 167-170. Published in 2001
- BMIR-2001-0994
- The new peer review
- I. S. Kohane, R. B. Altman
- Proc AMIA Symposium, 2000, 433-7. Published in 2001
- BMIR-2001-0992
- Diversity of gene expression in adenocarcinoma of the lung
- M. E. Garber, O. G. Troyanskaya, K. Schluens, S. Petersen, Z. Thaesler, M. Pacyna-Gengelbach, M. van de Rijn, G. D. Rosen, C. M. Perou, R. I. Whyte, R. B. Altman, P. O. Brown, D. Botstein
- Proceedings of the National Academy of Sciences, PNAS, 24, November 20, 2001, 13784-9. Published in 2001
- BMIR-2001-0906
- Constrained Global Optimization for Estimating Molecular
Structure from Atomic Distances
- G. A. Williams, J. M. Dugan, R. B. Altman
- Journal of Computational Biology. Published in 2001
- BMIR-2001-0903
- Biomedical Computation At Stanford University: A Larger
Umbrella for the Future
- R. B. Altman
- MD Computing, November/December 2000, 35 - 37. Published in 2001
- BMIR-2001-0901
- Management of Data, Knowledge, and Metadata on the
- D. E. Oliver, M. Hewett, D. L. Rubin, J. M. Stuart, T. E. Klein, R. B. Altman
- Semantic Web Working Symposium, Stanford, CA, 74-75. Published in 2001
- BMIR-2001-0898
- Challenges for Biomedical Informatics and
Pharmacogenomics
- R. B. Altman, T. E. Klein
- . Published in 2001
- BMIR-2001-0897
- Whole-genome expression analysis: challenges beyond
clustering
- R. B. Altman, S. Raychaudhuri
- Current Opinion in Structural Biology, 11, 340-347. Published in 2001
- BMIR-2001-0888
- Missing value estimation methods for DNA microarrays
- O. G. Troyanskaya, M. Cantor, G. Sherlock, P. O. Brown, T. J. Hastie, R. Tibshirani, D. Botstein, R. B. Altman
- Bioinformatics, 17, 6, 520-525. Published in 2001
- BMIR-2001-0886
- Basic microarray analysis: Grouping and feature reduction
- S. Raychaudhuri, P. D. Sutphin, J. T. Chang, R. B. Altman
- TRENDS in Biotechnology, 19, 5, 189-193. Published in 2001
- BMIR-2001-0863
- Using Metacomputing Tools to Facilitate Large Scale
Analyses of Biological Databases
- A. Waugh, G. A. Williams, L. Wei, R. B. Altman
- Pacific Symposium on Biocomputing 2001, Mauna Lani. Published in 2001
- BMIR-2001-0862
- Improving Biological Literature Improves Homology
Search
- J. T. Chang, S. Raychaudhuri, R. B. Altman
- Pacific Symposium on Biocomputing 2001, Mauna Lani, HI. Published in 2001
- BMIR-2000-1106
- Designing a Knowledge Base for Pharmacogenomics: an Ontology for Genetic Information
- D. L. Rubin, R. B. Altman
- Biomedical Computation at Stanford, Stanford, CA. Published in 2000
- BMIR-2000-1060
- Calculation of the relative geometry of tRNA;s in the ribosome from directed hydroxyl-radical probing data
- S. Joseph, M. L. Whirl, D. Kondo, H. F. Noller, R. B. Altman
- RNA, 6, 2, 220-32. Published in 2000
- BMIR-2000-1059
- The interactions between clinical informatics and bioinformatics: a case study.
- R. B. Altman
- J Am Med Inform Assoc, 7, 5, 439-43. Published in 2000
- BMIR-2000-0855
- ViewFeature: Integrated Feature Analysis and
Visualization
- D. R. Banatao, C. C. Huang, P. C. Babbitt, R. B. Altman, T. E. Klein
- Pacific Symposium on Biocomputing 2001, Mauna Lani, HI. Published in 2000
- BMIR-2000-0854
- The Interactions Between Clinical Informatics and
Bioinformatics: A Case Study
- R. B. Altman
- JAMIA, 7, 5, 439-443. Published in 2000
- BMIR-2000-0853
- Supervised Machine Learning: Analyzing Microarray Data Using Known Biological Categories
- S. Raychaudhuri, P. D. Sutphin, J. M. Stuart, A. J. Giaccia, R. B. Altman
- . Published in 2000
- BMIR-2000-0839
- CLEAVER : analyzing microarray data using known
biological categories
- S. Raychaudhuri, P. D. Sutphin, J. M. Stuart, R. B. Altman
- . Published in 2000
- BMIR-2000-0832
- Pattern recognition of genomic features with
microarrays: site typing of Mycobacterium tuberculosis strains
- S. Raychaudhuri, J. M. Stuart, X. S. Liu, P. M. Small, R. B. Altman
- 8th International Conference on Intelligent System for Molecular Biology, La Jolla, CA. Published in 2000
- BMIR-2000-0827
- Calculation of the relative geometry of tRNAs in the ribosome
from directed hydroxyl-radical probing data
- S. Joseph, M. L. Whirl, D. Kondo, H. F. Noller, R. B. Altman
- RNA, 6, 220-232. Published in 2000
- BMIR-1999-0996
- MutDB: annotating human variation with functionally relevant data
- S. D. Mooney, R. B. Altman
- Bioinformatics, 19, September 22-2003, 1858-1860. Published in 1999
- BMIR-1999-0804
- Principal Components Analysis to Summarize Microarray
Experiments: Application to Sporulation Time Series
- S. Raychaudhuri, J. M. Stuart, R. B. Altman
- Pacific Symposium on Biocomputing 2000, Honolulu, Hawaii. Published in 1999
- BMIR-1999-0803
- Generating Interactive Molecular Documentaries Using a
Library of Graphical Actions
- P. Pulavarthi, R. Chiang, R. B. Altman
- Pacific Symposium on Biocomputing 2000, Honolulu, Hawaii. Published in 1999
- BMIR-1999-0781
- Parallel Hierarchical Molecular Structure Estimation
- C. C. Chen, J. P. Singh, R. B. Altman
- Supercomputing '96 (The International Conference on High Performance Computing and Communications), Pittsburgh, PA. Published in 1999
- BMIR-1999-0773
- SOPHIA: A Flexible, Web-Based Knowledge Server
- N. Abernethy, J. J. Wu, M. Hewett, R. B. Altman
- IEEE Intelligent Systems and Their Applications, 14, 4, 79-85. Published in 1999
- BMIR-1999-0772
- Are Predicted Structures Good Enough to Preserve Functional
Sites
- L. Wei, E. S. Huang, R. B. Altman
- Structure, 7, 6, 643-650. Published in 1999
- BMIR-1999-0771
- Automated Diagnosis of Data-Model Conflicts Using Metadata
- R. O. Chen, R. B. Altman
- Journal of the American Medical Informatics Association, 6, 5, 374-392. Published in 1999
- BMIR-1999-0770
- AI in Medicine: The Spectrum of Challenges from Managed Care
to Molecular Medicine
- R. B. Altman
- AI Magazine, 20, 3, 67-77. Published in 1999
- BMIR-1999-0764
- Computational Modeling of Structured Experimental Data
- M. Bada, R. B. Altman
- Methods in Enzymology, 317, A, 470-491. Published in 1999
- BMIR-1998-0760
- Structural Uncertainty of Proteins in Solution by NMR. A
Re-evaluation of the Structure of the Lac Repressor Headpiece
- R. B. Altman, R. Pachter, O. Jardetzky
- Applied Magnetic Resonance, 4, 441-160. Published in 1998
- BMIR-1998-0744
- A Curriculum for Bioinformatics: The Time is Ripe
- R. B. Altman
- Bioinformatics, 14, 7, 549-550. Published in 1998
- BMIR-1998-0743
- Using Imperfect Secondary Structure Predictions To Improve
Molecular Structure Computations
- C. C. Chen, J. P. Singh, R. B. Altman
- Bioinformatics, 15, 1, 53-65. Published in 1998
- BMIR-1998-0731
- Bioinformatics in Support of Molecular Medicine
- R. B. Altman
- 1998 AMIA Annual Symposium, Orlando, FL. Published in 1998
- BMIR-1998-0729
- RiboWeb: An Ontology-Based System for Collaborative Molecular
- R. B. Altman, M. Bada, X. J. Chai, M. Carillo, R. O. Chen, N. Abernethy
- IEEE Intelligent Systems and Their Applications, 14, 5, 68-76. Published in 1998
- BMIR-1998-0725
- Updated Bibliography Using the RELATED ARTICLES
Function within PubMed
- X. S. Liu, R. B. Altman
- AMIA Fall Symposium, Orlando, FL. Published in 1998
- BMIR-1998-0724
- MHCWeb: Converting a WWW database into a
knowledge-based collaborative environment
- L. Hon, N. Abernethy, V. Brusic, J. Chai, R. B. Altman
- AMIA Fall Symposium, Orlando, FL. Published in 1998
- BMIR-1998-0723
- Graphical Style Sheets: Mapping Domain Data to Domain
Graphics
- R. M. Felciano, R. B. Altman
- . Published in 1998
- BMIR-1998-0710
- SOPHIA: Providing Basic Knowledge Services With A
Common DBMS
- N. Abernethy, R. B. Altman
- 5th International Workshop on Knowledge Representation Meets Databases (KRDB '98), Seattle, WA. Published in 1998
- BMIR-1998-0707
- The Hierarchical Organization of Molecular Structure
Computations
- C. C. Chen, J. P. Singh, R. B. Altman
- Journal of Computational Biology, 5, 3, 409-422. Published in 1998
- BMIR-1998-0706
- The Environment Around Salt Bridges in Helices
- C. H. Cheng, R. B. Altman
- . Published in 1998
- BMIR-1998-0704
- Computational Methods in Molecular Biology
- L. Wei, J. T. Chang, R. B. Altman
- . Published in 1998
- BMIR-1997-0698
- An Automated System for Generating Comparative Disease
Profiles and Making Diagnoses
- L. Wei, R. B. Altman
- . Published in 1997
- BMIR-1997-0692
- A Surface Measure for Probabilistic Structural
Computations
- J. P. Schmidt, C. C. Chen, J. L. Cooper, R. B. Altman
- Sixth International Conference on Intelligent Systems for Molecular Biology, Montreal, Canada. Published in 1997
- BMIR-1997-0691
- The Hierarchical Organization of Molecular Structure
Computations
- C. C. Chen, J. P. Singh, R. B. Altman
- . Published in 1997
- BMIR-1997-0690
- Graphical Style Sheets: Towards Reusable
Representations of Biomedical Graphics
- R. M. Felciano, R. B. Altman
- Human Factors in Computing Systems (CHI 98), Los Angeles, CA. Published in 1997
- BMIR-1997-0687
- Reuse, CORBA, and Knowledge-Based Systems
- J. Gennari, H. Cheng, R. B. Altman, M. A. Musen
- International Journal of Human-Computer Studies, 49, 4, 523-546. Published in 1997
- BMIR-1997-0682
- A Paradox for Threading: Scoring Functions Sensitive
to Alignment Error Have a More Difficult Search
- R. B. Altman, M. L. Whirl, A. Waugh, L. Wei, J. T. Chang
- . Published in 1997
- BMIR-1997-0680
- Recognizing Protein Binding Sites Using Statistical
Descriptions of their 3D Environments
- L. Wei, R. B. Altman
- Pacific Symposium of Biocomputing '98, Maui, HI. Published in 1997
- BMIR-1997-0676
- Supporting Structural Computations on the Web:
- R. O. Chen, R. M. Felciano, R. B. Altman
- . Published in 1997
- BMIR-1997-0667
- RiboWeb: Linking Structural Computations to a
- R. O. Chen, R. M. Felciano, R. B. Altman
- Fifth International Conference on Intelligent Systems for Molecular Biology, Halkidiki, Greece. Published in 1997
- BMIR-1997-0666
- Standardized Representations of the Literature:
- R. B. Altman, N. Abernethy, R. O. Chen
- Fifth International Conference on Intelligent Systems for Molecular Biology, Halkidiki, Greece. Published in 1997
- BMIR-1996-1004
- Sequence-specific 1H NMR assignments and secondary structure in solution of Escherichia coli trp repressor
- C. H. Arrowsmith, R. Pachter, R. B. Altman, S. B. Iyer, O. Jardetzky
- Biochemistry, 27, July 10, 1990, 6332-41. Published in 1996
- BMIR-1996-1003
- Images in chemical medicine. Knotted umbilical cord
- R. B. Altman, J. E. Merino
- New England Journal of Medicine, N Engl J Med, 9, August 12, 1996, 573. Published in 1996
- BMIR-1996-0655
- Informatics in the care of patients: Ten Notable Challenges
- R. B. Altman
- The Western Journal of Medicine, 166, 2, 118-122. Published in 1996
- BMIR-1996-0653
- Environmental Statistics Can Be Used to Recognize Sites Within Proteins
- L. Wei, R. B. Altman
- . Published in 1996
- BMIR-1996-0646
- Using the radial distributions of physical featuresto
compare amino acid environments and align amino acid sequences
- L. Wei, R. B. Altman, J. T. Chang
- Pacific Symposium on Biocomputing, Hawaii. Published in 1996
- BMIR-1996-0641
- RNA Secondary Structure as a Reusable Interface toBiological
- R. M. Felciano, R. O. Chen, R. B. Altman
- Gene-COMBIS, 190, GC59-GC70. Published in 1996
- BMIR-1996-0627
- Conserved Features in the Active Site of Nonhomologous Serine Proteases
- S. C. Bagley, R. B. Altman
- Folding & Design, 1, 5, 371-379. Published in 1996
- BMIR-1996-0626
- Computational Methods for Defining the Allowed Conformational Space of 16S rRNA based on Chemical Footprinting Data
- D. L. Fink, H. F. Noller, R. O. Chen, R. B. Altman
- RNA, 2, 851-866. Published in 1996
- BMIR-1996-0625
- LPFC: An internet library of protein family core structures
- R. Schmidt, M. Gerstein, R. B. Altman
- Protein Science, 6, 246-248. Published in 1996
- BMIR-1996-0624
- Constraining Volume by Matching the Moments of a Distance Distribution
- C. C. Chen, R. O. Chen, R. B. Altman
- Computer Applications in the Biosciences, 12, 4, 319-326. Published in 1996
- BMIR-1996-0621
- An Evaluation of the TransFER Model for Sharing Clinical Decision-Support Applications
- W. Sujansky, R. B. Altman
- 1996 AMIA Annual Fall Symposium, Washington, D.C.. Published in 1996
- BMIR-1996-0617
- Lamprey: Tracking Users on the World Wide Web
- R. M. Felciano, R. B. Altman
- 1996 AMIA Annual Fall Symposium, Washington, D.C.. Published in 1996
- BMIR-1995-0590
- Using a measure of structural variation to define a core for
the globins
- M. Gerstein, R. B. Altman
- Computer Applications in the Biosciences, 11, 633-644. Published in 1995
- BMIR-1995-0589
- Probabilistic Constraint Satisfaction with Non-Gaussian
Noise
- R. B. Altman, C. C. Chen, W. B. Poland, J. P. Singh
- . Published in 1995
- BMIR-1995-0588
- Parallel Protein Structure Determination from Uncertain
Data
- C. C. Chen, J. P. Singh, W. B. Poland, R. B. Altman
- Proceedings of Supercomputing '94, Washington, DC. Published in 1995
- BMIR-1995-0586
- A Programming Course in Bioinformatics for Computer and
Information Science Students
- R. B. Altman, J. Koza
- Pacific Symposium of Biocomputing '96, Hawaii. Published in 1995
- BMIR-1995-0580
- A Formal Evaluation of the TransFER Model for Bridging Heterogeneous Databases
- W. Sujansky, R. B. Altman
- . Published in 1995
- BMIR-1995-0568
- Characterizing oriented protein structural sites using
biochemical properties
- S. C. Bagley, L. Wei, C. H. Cheng, R. B. Altman
- Third International Conference on Intelligent Systems for Molecular Biology, Cambridge, England. Published in 1995
- BMIR-1995-0563
- Average Core Structures and Variability Measures for Protein
Families: Application to the Immunoglobulins
- M. Gerstein, R. B. Altman
- Journal of Molecular Biology, 251, 4, 161-175. Published in 1995
- BMIR-1995-0562
- Methods for Displaying Macromolecular Structural Uncertainty:
Application to the Globins
- R. B. Altman, C. Hughes, M. Gerstein
- Journal of Molecular Graphics, 13, 142-152. Published in 1995
- BMIR-1995-0556
- Biomolecular NMR Spectroscopy
- R. O. Chen, D. L. Fink, R. B. Altman
- . Published in 1995
- BMIR-1995-0555
- A Probabilistic Approach to Determining Biological Structure:
Integrating Uncertain Data Sources
- R. B. Altman
- International Journal of Human-Computer Studies, 42, 593-616. Published in 1995
- BMIR-1995-0554
- Finding an average core structure: Application to the
globins
- R. B. Altman, M. Gerstein
- Second International Conference on Intelligent Systems for Molecular Biology, Stanford, CA. Published in 1995
- BMIR-1995-0553
- Constraint Satisfaction Techniques for Modeling Large
Complexes: Application to the Central Domain of 16S Ribosomal RNA
- R. B. Altman, B. Weiser, H. F. Noller
- Second International Conference on Intelligent Systems for Molecular Biology, Stanford, CA. Published in 1995
- BMIR-1994-0550
- Characterizing the Microenvironment Surrounding Protein
Sites
- S. C. Bagley, R. B. Altman
- Protein Science, 4, 622-635. Published in 1994
- BMIR-1994-0549
- Reuse with Protege-II: From Elevators to Ribosomes
- J. Gennari, R. B. Altman, M. A. Musen
- ACM-SigSoft 1995 Symposium on Software Reusability, Seattle, WA. Published in 1994
- BMIR-1994-0533
- Towards a Standard Query Model for Sharing Decision-Support Applications
- W. Sujansky, R. B. Altman
- Eighteenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1994
- BMIR-1994-0531
- Probabilistic Constraint Satisfaction: Application to
Radiosurgery
- R. B. Altman, R. Tombropoulos
- Eighteenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1994
- BMIR-1994-0529
- Extraction of SNOMED Concepts from Medical Record Texts
- D. E. Oliver, R. B. Altman
- Eighteenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1994
- BMIR-1994-0524
- A Survey of Patient Access to Electronic Mail:
Attitudes, Barriers, and Opportunities
- D. B. Fridsma, P. M. Ford, R. B. Altman
- Eighteenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1994
- BMIR-1994-0515
- Bridging the Representational Heterogeneity of Clinical Databases
- W. Sujansky, R. B. Altman
- AAAI Spring Symposium on Artificial Intelligence in Medicine, Stanford, CA. Published in 1994
- BMIR-1994-0514
- Compositional Characteristic of Relatively Disordered Regions
in Proteins
- R. B. Altman, C. Hughes, O. Jardetzky
- Protein and Peptide Letters, 1, 120-127. Published in 1994
- BMIR-1993-0470
- Probabilistic Constraint Satisfaction with Structural
Models: Application to Organ Modeling by Radial Contours
- R. B. Altman, J. Brinkley
- Seventeenth Annual Symposium on Computer Applications in Medical Care, Washington, DC. Published in 1993
- BMIR-1993-0465
- Probabilistic Structure Calculations: A
Three-Dimensional tRNA Structure from Sequence Correlation Data
- R. B. Altman
- First International Conference on Intelligent systems for Molecular Biology, Bethesda, MD. Published in 1993
- BMIR-1993-0462
- A Probabilistic Algorithm for Calculating Structure:
Borrowing from Simulated Annealing
- R. B. Altman
- Ninth Conference on Uncertainty in Artificial Intelligence, Washington, DC. Published in 1993
- BMIR-1992-0484
- A systematic comparison of three structure determination methods of NMR data: Dependence upon quality and quantity of data
- I. Liu, D. Zhao, R. B. Altman, O. Jardetzky
- Journal of Biomolecular NMR, 2, 372-388. Published in 1992
- BMIR-1991-0485
- The solution structures of Escherichia coli trp repressor and trp aporepressor at an intermediate resolution
- C. H. Arrowsmith, R. Pachter, R. B. Altman, O. Jardetzky
- European Journal of Biochemistry, 202, 53-66. Published in 1991
- BMIR-1988-0197
- NMR Spectroscopy and Drug Research
- R. B. Altman, B. Duncan, J. Brinkley, B. G. Buchanan, O. Jardetzky
- . Published in 1988
- BMIR-1987-0196
- Partial compilation of strategic knowledge
- R. B. Altman, B. G. Buchanan
- AAAI-87, Sixth National Conference on Artificial Intelligence, Seattle, WA. Published in 1987
- BMIR-1987-0166
- PROTEAN: A new method for deriving solution structures of proteins
- B. Duncan, B. G. Buchanan, B. Hayes-Roth, O. Lichtarge, R. B. Altman, J. Brinkley, M. Hewett, C. Cornelius, O. Jardetzky
- Bulletin of Magnetic Resonance, 8, 3/4, 111-119. Published in 1987
- BMIR-1986-0170
- Application of Constraint Satisfaction Techniques to the Determination of Protein Tertiary Structure
- J. Brinkley, C. Cornelius, R. B. Altman, B. Hayes-Roth, O. Lichtarge, B. Duncan, B. G. Buchanan, O. Jardetzky
- . Published in 1986
- BMIR-1986-0169
- PROTEAN: Deriving protein structure from constraints
- B. Hayes-Roth, B. G. Buchanan, O. Lichtarge, M. Hewett, R. B. Altman, J. Brinkley, C. Cornelius, B. Duncan, O. Jardetzky
- AAAI 1986 Fifth National Conference on Artificial Intelligence, Los Altos, CA. Published in 1986
- BMIR-1986-0168
- A New Method for the Determination of Protein Structures in Solution from NMR
- O. Jardetzky, A. Lane, J. F. Lefevre, O. Lichtarge, B. Hayes-Roth, R. B. Altman, B. G. Buchanan
- XXIII Congress Ampere, Rome, Italy. Published in 1986
- BMIR-1986-0165
- New strategies for the determination of macromolecular structure in solution
- R. B. Altman, O. Jardetzky
- Journal of Biochemistry, 100, 6, 1403-1423. Published in 1986
- BMIR-1985-0164
- The heuristic refinement method for deriving solution structures of proteins
- B. G. Buchanan, B. Hayes-Roth, O. Lichtarge, R. B. Altman, J. Brinkley, M. Hewett, C. Cornelius, B. Duncan, O. Jardetzky
- . Published in 1985
- BMIR-1982-0076
- Quaternary Structural Changes in Aspartate Carbamoyltransferase of Escherichia Coli at pH 8.3 and pH 5.8
- R. B. Altman, J. E. Ladner, W. N. Lipscomb
- . Published in 1982
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